Composite dietary antioxidant index and HPV infection from single and mixed associations to SHAP-interpreted machine learning predictions

综合膳食抗氧化指数与HPV感染:基于单一和混合关联的SHAP解释机器学习预测

阅读:1

Abstract

BACKGROUND: Some studies have shown that dietary antioxidants may prevent the occurrence of Human Papillomavirus (HPV) infection. However, the relationship between the composite dietary antioxidant index (CDAI) and HPV infection among adult women in the United States remains unknown. METHODS: Participants from the National Health and Nutrition Examination Survey (NHANES) during 2003-2016 were included. Multivariable logistic regression, restricted cubic spline (RCS) regression, weighted quantile sum (WQS) regression, and Bayesian kernel machine regression (BKMR) were used to analyze the associations between CDAI and its sub-components and HPV infection. In addition, nine machine learning (ML) methods were employed to construct predictive models, and SHapley Additive exPlanations (SHAP) was used to further interpret the optimal model. RESULTS: This study enrolled 9,224 adult female participants. After adjusting for multiple confounding variables, CDAI was independently negatively associated with HPV infection (OR: 0.98, 95%CI: 0.97-0.99, p = 0.01). RCS indicated an L-shaped association between CDAI and HPV infection. In the WQS model, the WQS index of CDAI was still robustly negatively associated with HPV infection (OR: 0.78, 95%CI: 0.71-0.86, p < 0.0001). In the mixture effect, BKMR analysis confirmed the negative association between six antioxidants and HPV infection. Both WQS and BKMR confirmed that vitamin E had the strongest negative association with HPV infection. Additionally, among the nine machine-learning models, the Gradient Boosting Machine (GBM) showed the best predictive performance [area under curve (AUC) = 0.685]. SHAP analysis indicated that marital status, smoking, drinking, race, age, and CDAI had a significant impact on the model's prediction. CONCLUSION: Antioxidant-rich diets, especially increased intake of vitamin E, are significantly negatively associated with HPV infection. A GBM model with 12 features can effectively predict the occurrence of HPV infection, among which CDAI is an important factor in the model.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。