Genome-Wide Identification and Expression Profiling of the Aux/IAA Gene Family in Eggplant (Solanum melongena L.) Reveals Its Roles in Abiotic Stress and Auxin Responses

茄子(Solanum melongena L.)中Aux/IAA基因家族的全基因组鉴定和表达谱分析揭示了其在非生物胁迫和生长素反应中的作用

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Abstract

The auxin/indole-3-acetic acid (Aux/IAA) gene family encodes central regulators of plant development and stress adaptation. Eggplant (Solanum melongena), an economically important vegetable crop, is highly susceptible to abiotic stresses, yet its Aux/IAA family remains uncharacterized. This study aimed to systematically characterize the Aux/IAA gene family in eggplant and to explore its potential roles in development and abiotic stress responses using a genome-wide approach. Here, 35 SmIAA genes were identified through comprehensive bioinformatic analyses, including phylogenetic classification, synteny analysis, protein-protein interaction prediction, and qRT-PCR validation. Phylogenetic analysis classified these genes into Clades A and B, encompassing nine subgroups, with subgroup B4 showing lineage-specific expansion and encoding non-canonical Aux/IAA proteins. Expression profiling revealed that SmIAA18 and SmIAA33 were strongly responsive to salt stress, whereas SmIAA1/2/8 were preferentially induced by drought stress. Furthermore, SmIAA8 and SmIAA33 exhibited contrasting responses to IAA treatment, characterized by delayed induction and rapid repression, respectively. This study presents the first genome-wide analysis of the Aux/IAA family in eggplant, elucidating its roles in development and stress adaptation, and provides valuable genetic resources for the molecular breeding of stress-tolerant varieties.

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