VUScope: a mathematical model for evaluating image-based drug response measurements and predicting long-term incubation outcomes

VUScope:一种用于评估基于图像的药物反应测量结果并预测长期潜伏期结果的数学模型

阅读:3

Abstract

MOTIVATION: Live-cell imaging-based drug screening increases the likelihood of identifying effective and safe drugs by providing dynamic, high-content, and physiologically relevant data. As a result, it improves the success rate of drug development and facilitates the translation of benchside discoveries to bedside applications. Despite these advantages, no comprehensive metrics currently exist to evaluate dose-time-dependent drug responses. To address this gap, we established a systematic framework to assess drug effects across a range of concentrations and exposure durations simultaneously. This metric enables more accurate evaluation of drug responses measured by live-cell imaging. RESULTS: We employed treatment concentrations ranging from 0 to 10 μM and performed live-cell imaging-based measurements over a 120-h incubation period. To analyze the experimental data, we developed VUScope, a new mathematical model combining the 4-parameter logistic curve and a logistic function to characterize dose-time-dependent responses. This enabled us to calculate the Growth Rate Inhibition Volume Under the dose-time-response Surface (GRIVUS), which serves as a critical metric for assessing dynamic drug responses. Furthermore, our mathematical model allowed us to predict long-term treatment responses based on short-term drug responses. We validated the predictive capabilities of our model using independent datasets and observed that VUScope enhances prediction accuracy and offers deeper insights into drug effects than previously possible. By integrating VUScope into high-throughput drug screening platforms, we can further improve the efficacy of drug development and treatment selection. AVAILABILITY AND IMPLEMENTATION: We have made VUScope more accessible to users conducting pharmacological studies by uploading a detailed description, example datasets, and the source code to vuscope.albi.hhu.de, https://github.com/AlBi-HHU/VUScope, and https://doi.org/10.5281/zenodo.17610533.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。