Identifying ferroptosis-related genes in lung adenocarcinoma using random walk with restart in the PPI network

利用PPI网络中的随机游走重启方法识别肺腺癌中与铁死亡相关的基因

阅读:1

Abstract

Lung adenocarcinoma (LUAD), the most common non-small cell lung cancer subtype, often presents with subtle early symptoms leading to delayed diagnosis. Ferroptosis, a cell death process associated with iron metabolism dysregulation, has been linked to cancer onset, progression, and treatment resistance. Thus, identifying ferroptosis-related genes may offer novel insights for LUAD therapy. In this study, we employed the random walk with restart (RWR) algorithm on the LUAD protein-protein interaction (PPI) network to predict ferroptosis-related target genes. Gene set enrichment analysis (GSEA) explored the relationship between XBP1 and ferroptosis, while tumor microenvironment analysis evaluated the correlation between XBP1 expression and immune cell infiltration. External cohorts validation was performed using the GSE118370, GSE68465, and TCGA-LUAD datasets. Our analysis identified XBP1 as a potential ferroptosis-related gene in LUAD. GSEA confirmed a strong association between XBP1 and the ferroptosis process, along with its involvement in the tumor microenvironment, and external cohorts demonstrated its high expression and significant correlation with immune cell infiltration in LUAD tissues. These findings suggest that XBP1 plays a key role in LUAD development and progression, providing new perspectives for precision therapies targeting the ferroptosis pathway.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。