New scaffolds for type II JAK2 inhibitors overcome the acquired G993A resistance mutation

新型 II 型 JAK2 抑制剂支架克服了获得的 G993A 耐药突变

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作者:Matthew L Arwood ,Yao Liu ,Shannon K Harkins ,David M Weinstock ,Lei Yang ,Kristen E Stevenson ,Olivia D Plana ,Jingyun Dong ,Haley Cirka ,Kristen L Jones ,Anniina T Virtanen ,Dikshat G Gupta ,Amanda Ceas ,Brian Lawney ,Akinori Yoda ,Catharine Leahy ,Mingfeng Hao ,Zhixiang He ,Hwan Geun Choi ,Yaning Wang ,Olli Silvennoinen ,Stevan R Hubbard ,Tinghu Zhang ,Nathanael S Gray ,Loretta S Li

Abstract

Recurrent JAK2 alterations are observed in myeloproliferative neoplasms, B-cell acute lymphoblastic leukemia, and other hematologic malignancies. Currently available type I JAK2 inhibitors have limited activity in these diseases. Preclinical data support the improved efficacy of type II JAK2 inhibitors, which lock the kinase in the inactive conformation. By screening small molecule libraries, we identified a lead compound with JAK2 selectivity. We highlight analogs with on-target biochemical and cellular activity and demonstrate in vivo activity using a mouse model of polycythemia vera. We present a co-crystal structure that confirms the type II binding mode of our compounds with the "DFG-out" conformation of the JAK2 activation loop. Finally, we identify a JAK2 G993A mutation that confers resistance to the type II JAK2 inhibitor CHZ868 but not to our analogs. These data provide a template for identifying novel type II kinase inhibitors and inform further development of agents targeting JAK2 that overcome resistance. Keywords: B-ALL; CHZ868; CRLF2; JAK2; kinase; myeloproliferative neoplasm; resistance; ruxolitinib; type II inhibitor.

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