Comparison of DNA methylation patterns of parentally imprinted genes in placenta derived from IVF conceptions in two different culture media

两种不同培养基中 IVF 受孕胎盘亲本印迹基因 DNA 甲基化模式比较

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作者:Callista L Mulder, Tess M Wattimury, Aldo Jongejan, Cindy M de Winter-Korver, Saskia K M van Daalen, Robert B Struijk, Susanne C M Borgman, Yvonne Wurth, Dimitri Consten, Jannie van Echten-Arends, Sebastiaan Mastenbroek, John C M Dumoulin, Sjoerd Repping, Ans M M van Pelt, Aafke P A van Montfoort

Methods

To identify differential DNA methylation of imprinted genes, we opted for an amplicon-based sequencing strategy on an Illumina MiSeq sequencing platform. DNA was isolated and 34 DMRs associated with well-defined parentally imprinted genes were amplified in a two-step PCR before sequencing using MiSeq technology. Sequencing data were analyzed in a multivariate fashion to eliminate possible confounding effects. Main

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