Development of rapid and simple experimental and in silico serotyping systems for Citrobacter

开发快速简便的柠檬酸杆菌实验和计算机血清分型系统

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作者:Chengqian Qian, Yuhui Du, Huiying Li, Pan Wu, Lu Wang, Yi Wei, Hengchun Cao, Zhiqiu Yin, Yang Zhang, Yiming Zhu, Xi Guo, Bin Liu

Aim

Members of the genus Citrobacter are important opportunistic pathogens responsible for high mortality rate. Therefore, in this study, we aimed to develop efficient and accurate Citrobacter typing schemes for clinical detection and epidemiological surveillance. Materials &

Conclusion

Both serotyping tools are reliable, and our observations are biologically and clinically relevant for understanding and managing Citrobacter infection.

Methods

Using genomic and experimental analyses, we located the O-antigen biosynthesis gene clusters in Citrobacter genome for the first time, and used comparative genomic analyses to reveal the specific genes in different Citrobacter serotypes.

Results

Based on the specific genes in O-antigen biosynthesis gene clusters of Citrobacter, we established experimental and in silico serotyping systems for this bacterium.

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