KMT2D Deficiency Impairs Super-Enhancers to Confer a Glycolytic Vulnerability in Lung Cancer

KMT2D缺陷会损害超级增强子,从而导致肺癌细胞糖酵解脆弱性。

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作者:Hunain Alam ,Ming Tang ,Mayinuer Maitituoheti ,Shilpa S Dhar ,Manish Kumar ,Chae Young Han ,Chandrashekar R Ambati ,Samir B Amin ,Bingnan Gu ,Tsai-Yu Chen ,Yu-Hsi Lin ,Jichao Chen ,Florian L Muller ,Nagireddy Putluri ,Elsa R Flores ,Francesco J DeMayo ,Laura Baseler ,Kunal Rai ,Min Gyu Lee

Abstract

Epigenetic modifiers frequently harbor loss-of-function mutations in lung cancer, but their tumor-suppressive roles are poorly characterized. Histone methyltransferase KMT2D (a COMPASS-like enzyme, also called MLL4) is among the most highly inactivated epigenetic modifiers in lung cancer. Here, we show that lung-specific loss of Kmt2d promotes lung tumorigenesis in mice and upregulates pro-tumorigenic programs, including glycolysis. Pharmacological inhibition of glycolysis preferentially impedes tumorigenicity of human lung cancer cells bearing KMT2D-inactivating mutations. Mechanistically, Kmt2d loss widely impairs epigenomic signals for super-enhancers/enhancers, including the super-enhancer for the circadian rhythm repressor Per2. Loss of Kmt2d decreases expression of PER2, which regulates multiple glycolytic genes. These findings indicate that KMT2D is a lung tumor suppressor and that KMT2D deficiency confers a therapeutic vulnerability to glycolytic inhibitors. Keywords: KMT2D; epigenetic modifier; glycolysis; histone methylation; histone methyltransferase; inhibitor; lung cancer; metabolism; super-enhancer; tumor suppressor.

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