Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in geese ovarian development from the birth /laying to ceased periods

整合分析circRNA、miRNA和mRNA谱,揭示ceRNA在鹅卵巢发育过程中从出生/产蛋期到停止产蛋期的调控作用。

阅读:1

Abstract

Laying performance is a key metric for assessing avian reproductive efficiency. Ovarian tissues from Wanxi White Geese (WWGs) at different laying stages (birth period, laying period, and ceased period) were used in this study as research subjects. mRNA and circRNA expression profiles of ovarian tissues were constructed across various laying phases using transcriptome sequencing technology and bioinformatics approaches. The results revealed a total of 504 differentially expressed circRNAs (DEcircRNAs) (BO vs LO), 369 DEcircRNAs (LO vs CO), and 306 DEcircRNAs (BO vs CO) across different laying stages. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses demonstrated that DEcircRNA target genes were significantly enriched in processes including ovarian granulosa-cell proliferation, apoptosis, differentiation, and folliculogenesis. Concurrently, these targets were prominently implicated in phosphoinositide metabolism and played key roles in the GnRH, MAPK, and p53 signaling pathways. The expression of DEGs and proteins in ovarian tissues at different laying periods was detected by qRT-PCR technology and Western blot technology respectively. The results showed that the sequencing results were true and reliable. A ceRNA (circRNA-miRNA-mRNA) network was successfully constructed, and four key ceRNA regulatory axes implicated in ovarian development and steroid hormone synthesis/secretion were identified, namely novel_circ_107999-miR-1 44-y-NR2F2/TGM2, novel_circ_072697-miR-143-x-FMN2, novel_circ_031722-miR-101-x-CASP2/RPN 2, and novel_circ_100886-miR-101-y-PTX3/SEMA3 E/HSD3B1. The dual-luciferase reporter gene assay confirmed a targeting relationship between the novel_circ_072697-miR-143-x-FMN2 axis. In conclusion, this study system-atically explored the coordinated regulatory mechanisms of DEcircRNAs and their target genes, providing a theoretical foundation for identifying the key genes and molecular mechanisms underlying ovarian development in WWGs across different laying stages. These findings advance our understanding of the biological features of seasonal reproduction in this species and offer valuable insights for enhancing avian reproductive performance.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。