A compendium of covariances and correlation coefficients of coalescent tree properties

合并树属性的协方差和相关系数汇编

阅读:1

Abstract

Gene genealogies are frequently studied by measuring properties such as their height (H), length (L), sum of external branches (E), sum of internal branches (I), and mean of their two basal branches (B), and the coalescence times that contribute to the other genealogical features (T). These tree properties and their relationships can provide insight into the effects of population-genetic processes on genealogies and genetic sequences. Here, under the coalescent model, we study the 15 correlations among pairs of features of genealogical trees: H(n), L(n), E(n), I(n), B(n), and T(k) for a sample of size n, with 2≤k≤n. We report high correlations among H(n), L(n), I(n), and B(n), with all pairwise correlations of these quantities having values greater than or equal to 6[6ζ(3)+6-π(2)]/(π18+9π(2)-π(4))≈0.84930 in the limit as n→∞, where ζ is the Riemann zeta function. Although E(n) has expectation 2 for all n and H(n) has expectation 2 in the n→∞ limit, their limiting correlation is 0. The results contribute toward understanding features of the shapes of coalescent trees.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。