Cloning and Characterization of 12 TCP Genes in Medicinal Plant Plantago asiatica via De Novo Transcriptome Assembly

利用从头转录组组装技术克隆和鉴定药用植物车前草中的12个TCP基因

阅读:1

Abstract

Background:Plantago asiatica (P. asiatica) is an important Chinese traditional medicinal plant of the family Plantaginaceae and widely used in pharmaceutical industries. TCP transcription factors play an important role in plant development, but a limited number of studies on this have been reported in P. asiatica.Methods: Since genome assembly was not available, in this study, we used the de novo transcriptome assembly method to genome-wide-characterize the TCP gene family in P. asiatica. Up to 70.7 M high-quality paired-end reads were generated after sequencing and a total of 12 TCP genes were cloned by the predicted bioinformatic results, which were named PaTCP1-12. Results: Phylogenetic tree, motif analysis and subcellular localization results revealed that these PaTCPs were conserved compared to those from the model plant, Arabidopsis. Expression analysis suggested that most of the TCPs were highly expressed in both the leaf and root, while PaTCP1, PaTCP6 and PaTCP9 could also be detected in the seed. Conclusions: Since seed characteristics are one of the main agronomical traits in P. asiatica, the finding of PaTCP1, PaTCP6 and PaTCP9 expression patterns in the stem suggested an important role for further plant improvement.

特别声明

1、本页面内容包含部分的内容是基于公开信息的合理引用;引用内容仅为补充信息,不代表本站立场。

2、若认为本页面引用内容涉及侵权,请及时与本站联系,我们将第一时间处理。

3、其他媒体/个人如需使用本页面原创内容,需注明“来源:[生知库]”并获得授权;使用引用内容的,需自行联系原作者获得许可。

4、投稿及合作请联系:info@biocloudy.com。