De novo variants in genes regulating stress granule assembly associate with neurodevelopmental disorders

调控应激颗粒组装的基因中的新生变异与神经发育障碍相关

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作者:Xiangbin Jia ,Shujie Zhang ,Senwei Tan ,Bing Du ,Mei He ,Haisong Qin ,Jia Chen ,Xinyu Duan ,Jingsi Luo ,Fei Chen ,Luping Ouyang ,Jian Wang ,Guodong Chen ,Bin Yu ,Ge Zhang ,Zimin Zhang ,Yongqing Lyu ,Yi Huang ,Jian Jiao ,Jin Yun Helen Chen ,Kathryn J Swoboda ,Emanuele Agolini ,Antonio Novelli ,Chiara Leoni ,Giuseppe Zampino ,Gerarda Cappuccio ,Nicola Brunetti-Pierri ,Benedicte Gerard ,Emmanuelle Ginglinger ,Julie Richer ,Hugh McMillan ,Alexandre White-Brown ,Kendra Hoekzema ,Raphael A Bernier ,Evangeline C Kurtz-Nelson ,Rachel K Earl ,Claartje Meddens ,Marielle Alders ,Meredith Fuchs ,Roseline Caumes ,Perrine Brunelle ,Thomas Smol ,Ryan Kuehl ,Debra-Lynn Day-Salvatore ,Kristin G Monaghan ,Michelle M Morrow ,Evan E Eichler ,Zhengmao Hu ,Ling Yuan ,Jieqiong Tan ,Kun Xia ,Yiping Shen ,Hui Guo

Abstract

Stress granules (SGs) are cytoplasmic assemblies in response to a variety of stressors. We report a new neurodevelopmental disorder (NDD) with common features of language problems, intellectual disability, and behavioral issues caused by de novo likely gene-disruptive variants in UBAP2L, which encodes an essential regulator of SG assembly. Ubap2l haploinsufficiency in mouse led to social and cognitive impairments accompanied by disrupted neurogenesis and reduced SG formation during early brain development. On the basis of data from 40,853 individuals with NDDs, we report a nominally significant excess of de novo variants within 29 genes that are not implicated in NDDs, including 3 essential genes (G3BP1, G3BP2, and UBAP2L) in the core SG interaction network. We validated that NDD-related de novo variants in newly implicated and known NDD genes, such as CAPRIN1, disrupt the interaction of the core SG network and interfere with SG formation. Together, our findings suggest the common SG pathology in NDDs.

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