Engineered minimal type I CRISPR-Cas system for transcriptional activation and base editing in human cells

为人类细胞中的转录激活和碱基编辑而设计的最小 I 型 CRISPR-Cas 系统

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作者:Jing Guo #, Luyao Gong #, Haiying Yu #, Ming Li, Qiaohui An, Zhenquan Liu, Shuru Fan, Changjialian Yang, Dahe Zhao, Jing Han, Hua Xiang

Abstract

Type I CRISPR-Cas systems are widespread and have exhibited high versatility and efficiency in genome editing and gene regulation in prokaryotes. However, due to the multi-subunit composition and large size, their application in eukaryotes has not been thoroughly investigated. Here, we demonstrate that the type I-F2 Cascade, the most compact among type I systems, with a total gene size smaller than that of SpCas9, can be developed for transcriptional activation in human cells. The efficiency of the engineered I-F2 tool can match or surpass that of dCas9. Additionally, we create a base editor using the I-F2 Cascade, which induces a considerably wide editing window (~30 nt) with a bimodal distribution. It can expand targetable sites, which is useful for disrupting functional sequences and genetic screening. This research underscores the application of compact type I systems in eukaryotes, particularly in the development of a base editor with a wide editing window.

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