The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development

MerR 样蛋白 BldC 与 DNA 直接重复序列结合,形成协同多聚体,从而调节链霉菌的发育

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作者:Maria A Schumacher, Chris D den Hengst, Matthew J Bush, T B K Le, Ngat T Tran, Govind Chandra, Wenjie Zeng, Brady Travis, Richard G Brennan, Mark J Buttner

Abstract

Streptomycetes are notable for their complex life cycle and production of most clinically important antibiotics. A key factor that controls entry into development and the onset of antibiotic production is the 68-residue protein, BldC. BldC is a putative DNA-binding protein related to MerR regulators, but lacks coiled-coil dimerization and effector-binding domains characteristic of classical MerR proteins. Hence, the molecular function of the protein has been unclear. Here we show that BldC is indeed a DNA-binding protein and controls a regulon that includes other key developmental regulators. Intriguingly, BldC DNA-binding sites vary significantly in length. Our BldC-DNA structures explain this DNA-binding capability by revealing that BldC utilizes a DNA-binding mode distinct from MerR and other known regulators, involving asymmetric head-to-tail oligomerization on DNA direct repeats that results in dramatic DNA distortion. Notably, BldC-like proteins radiate throughout eubacteria, establishing BldC as the founding member of a new structural family of regulators.

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