Structural and functional impact by SARS-CoV-2 Omicron spike mutations

SARS-CoV-2 Omicron 刺突突变对结构和功能的影响

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作者:Jun Zhang, Yongfei Cai, Christy L Lavine, Hanqin Peng, Haisun Zhu, Krishna Anand, Pei Tong, Avneesh Gautam, Megan L Mayer, Sophia Rits-Volloch, Shaowei Wang, Piotr Sliz, Duane R Wesemann, Wei Yang, Michael S Seaman, Jianming Lu, Tianshu Xiao, Bing Chen0

Abstract

The Omicron variant of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), bearing an unusually high number of mutations, has become a dominant strain in many countries within several weeks. We report here structural, functional, and antigenic properties of its full-length spike (S) protein with a native sequence in comparison with those of previously prevalent variants. Omicron S requires a substantially higher level of host receptor ACE2 for efficient membrane fusion than other variants, possibly explaining its unexpected cellular tropism. Mutations not only remodel the antigenic structure of the N-terminal domain of the S protein but also alter the surface of the receptor-binding domain in a way not seen in other variants, consistent with its remarkable resistance to neutralizing antibodies. These results suggest that Omicron S has acquired an extraordinary ability to evade host immunity by excessive mutations, which also compromise its fusogenic capability.

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