Detecting Adaptation with Genome-Scale Molecule Evolutionary Analysis: An Educational Primer for Use with "RNA Interference Pathways Display High Rates of Adaptive Protein Evolution in Multiple Invertebrates"

利用基因组规模分子进化分析检测适应性:配合“RNA干扰通路在多种无脊椎动物中表现出高适应性蛋白质进化率”一文的教育入门指南

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Abstract

Hosts and pathogens impose coevolutionary pressure on each other as pathogens strive to establish themselves and hosts seek to suppress infection. RNA interference (RNAi) is a mechanism by which cells repress viruses and transposable elements, thereby serving as a form of immune defense. Previous studies have shown that antiviral RNAi genes evolve extraordinarily quickly in the fruit fly Drosophila melanogaster, suggesting that they may adaptively coevolve with viruses and transposable elements. An article by Palmer and colleagues extends this observation to nematodes and multiple insects. Their article can be combined with this Primer to demonstrate the use of comparative genomics and molecular evolutionary analyses in the measurement of natural selection.

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