Structures of HIV-1 Env V1V2 with broadly neutralizing antibodies reveal commonalities that enable vaccine design

HIV-1 Env V1V2 的结构与广泛中和抗体揭示出可用于疫苗设计的共性

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作者:Jason Gorman, Cinque Soto, Max M Yang, Thaddeus M Davenport, Miklos Guttman, Robert T Bailer, Michael Chambers, Gwo-Yu Chuang, Brandon J DeKosky, Nicole A Doria-Rose, Aliaksandr Druz, Michael J Ernandes, Ivelin S Georgiev, Marissa C Jarosinski, M Gordon Joyce, Thomas M Lemmin, Sherman Leung, Mark K

Abstract

Broadly neutralizing antibodies (bNAbs) against HIV-1 Env V1V2 arise in multiple donors. However, atomic-level interactions had previously been determined only with antibodies from a single donor, thus making commonalities in recognition uncertain. Here we report the cocrystal structure of V1V2 with antibody CH03 from a second donor and model Env interactions of antibody CAP256-VRC26 from a third donor. These V1V2-directed bNAbs used strand-strand interactions between a protruding antibody loop and a V1V2 strand but differed in their N-glycan recognition. Ontogeny analysis indicated that protruding loops develop early, and glycan interactions mature over time. Altogether, the multidonor information suggested that V1V2-directed bNAbs form an 'extended class', for which we engineered ontogeny-specific antigens: Env trimers with chimeric V1V2s that interacted with inferred ancestor and intermediate antibodies. The ontogeny-based design of vaccine antigens described here may provide a general means for eliciting antibodies of a desired class.

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