ascend: R package for analysis of single-cell RNA-seq data

上升:用于分析单细胞 RNA 序列数据的 R 包

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作者:Anne Senabouth, Samuel W Lukowski, Jose Alquicira Hernandez, Stacey B Andersen, Xin Mei, Quan H Nguyen, Joseph E Powell

Background

Recent developments in single-cell RNA sequencing (scRNA-seq) platforms have vastly increased the number of cells typically assayed in an experiment. Analysis of scRNA-seq data is multidisciplinary in nature, requiring careful consideration of the application of statistical

Conclusions

ascend is designed to work with scRNA-seq data generated by any high-throughput platform and includes functions to convert data objects between software packages. The ascend workflow is simple and interactive, as well as suitable for implementation by a broad range of users, including those with little programming experience.

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