Fruit sugar hub: gene regulatory network associated with soluble solids content (SSC) in Prunus persica

桃子果实糖分中心:与桃子可溶性固形物含量(SSC)相关的基因调控网络

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作者:Gerardo Núñez-Lillo ,Victoria Lillo-Carmona ,Alonso G Pérez-Donoso ,Romina Pedreschi ,Reinaldo Campos-Vargas ,Claudio Meneses

Abstract

Chilean peach growers have achieved worldwide recognition for their high-quality fruit products. Among the main factors influencing peach fruit quality, sweetness is pivotal for maintaining the market's competitiveness. Numerous studies have been conducted in different peach-segregating populations to unravel SSC regulation. However, different cultivars may also have distinct genetic conformation, and other factors, such as environmental conditions, can significantly impact SSC. Using a transcriptomic approach with a gene co-expression network analysis, we aimed to identify the regulatory mechanism that controls the sugar accumulation process in an 'O × N' peach population. This population was previously studied through genomic analysis, associating LG5 with the genetic control of the SSC trait. The results obtained in this study allowed us to identify 91 differentially expressed genes located on chromosome 5 of the peach genome as putative new regulators of sugar accumulation in peach, together with a regulatory network that involves genes directly associated with sugar transport (PpSWEET15), cellulose biosynthesis (PpCSLG2), flavonoid biosynthesis (PpPAL1), pectin modifications (PpPG, PpPL and PpPMEi), expansins (PpEXPA1 and PpEXPA8) and several transcription factors (PpC3H67, PpHB7, PpRVE1 and PpCBF4) involved with the SSC phenotype. These results contribute to a better understanding of the genetic control of the SSC trait for future breeding programs in peaches. Keywords: PpC3H67; PpSWEET15; Gene network; Peach; RNA-seq; Sugar accumulation; Sweetness.

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