A prognostic molecular signature of hepatic steatosis is spatially heterogeneous and dynamic in human liver

肝脏脂肪变性的预后分子特征在人类肝脏中具有空间异质性和动态性

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作者:Andrew S Perry, Niran Hadad, Emeli Chatterjee, Maria Jimenez-Ramos, Eric Farber-Eger, Rashedeh Roshani, Lindsey K Stolze, Michael J Betti, Shilin Zhao, Shi Huang, Liesbet Martens, Timothy J Kendall, Tinne Thone, Kaushik Amancherla, Samuel Bailin, Curtis L Gabriel, John Koethe, J Jeffrey Carr, James

Abstract

Hepatic steatosis is a central phenotype in multi-system metabolic dysfunction and is increasing in parallel with the obesity pandemic. We use a translational approach integrating clinical phenotyping and outcomes, circulating proteomics, and tissue transcriptomics to identify dynamic, functional biomarkers of hepatic steatosis. Using multi-modality imaging and broad proteomic profiling, we identify proteins implicated in the progression of hepatic steatosis that are largely encoded by genes enriched at the transcriptional level in the human liver. These transcripts are differentially expressed across areas of steatosis in spatial transcriptomics, and several are dynamic during stages of steatosis. Circulating multi-protein signatures of steatosis strongly associate with fatty liver disease and multi-system metabolic outcomes. Using a humanized "liver-on-a-chip" model, we induce hepatic steatosis, confirming cell-specific expression of prioritized targets. These results underscore the utility of this approach to identify a prognostic, functional, dynamic "liquid biopsy" of human liver, relevant to biomarker discovery and mechanistic research applications.

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