Molecular epidemiology of SARS-CoV-2 clusters caused by asymptomatic cases in Anhui Province, China

安徽省无症状感染者引发的 SARS-CoV-2 聚集性疫情的分子流行病学

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作者:Yuan Yuan, Jun He, Lei Gong, Weiwei Li, Liangliang Jiang, Jiang Liu, Qingqing Chen, Junling Yu, Sai Hou, Yonglin Shi, Siqi Lu, Zhuhui Zhang, Yinglu Ge, Nan Sa, Lan He, Jiabing Wu, Yong Sun, Zhirong Liu

Background

COVID-19 is a newly emerging disease caused by a novel coronavirus (SARS-CoV-2), which spread globally in early 2020. Asymptomatic carriers of the virus contribute to the propagation of this disease, and the existence of asymptomatic infection has caused widespread fear and concern in the control of this pandemic.

Conclusions

Both clusters may have resulted from close contact and droplet-spreading and asymptomatic infections were identified as the initial cause. We also analyzed the infectiousness of asymptomatic cases and the challenges to the current epidemic to provided information for the development of control strategies.

Methods

In this study, we investigated the origin and transmission route of SARS-CoV-2 in Anhui's two clusters, analyzed the role and infectiousness of asymptomatic patients in disease transmission, and characterized the complete spike gene sequences in the Anhui strains.

Results

We conducted an epidemiological investigation of two clusters caused by asymptomatic infections sequenced the spike gene of viruses isolated from 12 patients. All cases of the two clusters we investigated had clear contact histories, both from Wuhan, Hubei province. The viruses isolated from two outbreaks in Anhui were found to show a genetically close link to the virus from Wuhan. In addition, new single nucleotide variations were discovered in the spike gene. Conclusions: Both clusters may have resulted from close contact and droplet-spreading and asymptomatic infections were identified as the initial cause. We also analyzed the infectiousness of asymptomatic cases and the challenges to the current epidemic to provided information for the development of control strategies.

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