Architecture of high-affinity unnatural-base DNA aptamers toward pharmaceutical applications

面向药物应用的高亲和力非天然碱基 DNA 适体的结构

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作者:Ken-ichiro Matsunaga, Michiko Kimoto, Charlotte Hanson, Michael Sanford, Howard A Young, Ichiro Hirao

Abstract

We present a remodeling method for high-affinity unnatural-base DNA aptamers to augment their thermal stability and nuclease resistance, for use as drug candidates targeting specific proteins. Introducing a unique mini-hairpin DNA provides robust stability to unnatural-base DNA aptamers generated by SELEX using genetic alphabet expansion, without reducing their high affinity. By this method, >80% of the remodeled DNA aptamer targeting interferon-γ (KD of 33 pM) survived in human serum at 37 °C after 3 days under our experimental conditions, and sustainably inhibited the biological activity of interferon-γ.

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