Characterization and Phylodynamics of Reassortant H12Nx Viruses in Northern Eurasia

北欧重配 H12Nx 病毒的表征和系统发育动力学

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作者:Kirill Sharshov, Junki Mine, Ivan Sobolev, Olga Kurskaya, Nikita Dubovitskiy, Marsel Kabilov, Tatiana Alikina, Momoko Nakayama, Ryota Tsunekuni, Anastasiya Derko, Elena Prokopyeva, Alexander Alekseev, Michael Shchelkanov, Alexey Druzyaka, Alimurad Gadzhiev, Yuko Uchida, Alexander Shestopalov, Takehi

Abstract

Wild waterfowl birds are known to be the main reservoir for a variety of avian influenza viruses of different subtypes. Some subtypes, such as H2Nx, H8Nx, H12Nx, and H14Nx, occur relatively rarely in nature. During 10-year long-term surveillance, we isolated five rare H12N5 and one H12N2 viruses in three different distinct geographic regions of Northern Eurasia and studied their characteristics. H12N2 from the Far East region was a double reassortant containing hemagglutinin (HA), non-structural (NS) and nucleoprotein (NP) segments of the American lineage and others from the classical Eurasian avian-like lineage. H12N5 viruses contain Eurasian lineage segments. We suggest a phylogeographical scheme for reassortment events associated with geographical groups of aquatic birds and their migration flyways. The H12N2 virus is of particular interest as this subtype has been found in common teal in the Russian Far East region, and it has a strong relation to North American avian influenza virus lineages, clearly showing that viral exchange of segments between the two continents does occur. Our results emphasize the importance of Avian Influenza Virus (AIV) surveillance in Northern Eurasia for the annual screening of virus characteristics, including the genetic constellation of rare virus subtypes, to understand the evolutionary ecology of AIV.

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