日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Quality assessment of gene repertoire annotations with OMArk

利用 OMArk 对基因库注释进行质量评估

Nevers, Yannis; Warwick Vesztrocy, Alex; Rossier, Victor; Train, Clément-Marie; Altenhoff, Adrian; Dessimoz, Christophe; Glover, Natasha M

Orthology inference at scale with FastOMA

利用 FastOMA 进行大规模直系同源词推断

Majidian, Sina; Nevers, Yannis; Yazdizadeh Kharrazi, Ali; Warwick Vesztrocy, Alex; Pascarelli, Stefano; Moi, David; Glover, Natasha; Altenhoff, Adrian M; Dessimoz, Christophe

EdgeHOG: a method for fine-grained ancestral gene order inference at large scale

EdgeHOG:一种大规模精细祖先基因顺序推断方法

Bernard, Charles; Nevers, Yannis; Karampudi, Naga Bhushana Rao; Gilbert, Kimberly J; Train, Clément; Warwick Vesztrocy, Alex; Glover, Natasha; Altenhoff, Adrian; Dessimoz, Christophe

A large collection of bioinformatics question-query pairs over federated knowledge graphs: methodology and applications

基于联邦知识图谱的大量生物信息学问答对:方法论和应用

Bolleman, Jerven; Emonet, Vincent; Altenhoff, Adrian; Bairoch, Amos; Blatter, Marie-Claude; Bridge, Alan; Duvaud, Séverine; Gasteiger, Elisabeth; Kuznetsov, Dmitry; Moretti, Sébastien; Michel, Pierre-Andre; Morgat, Anne; Pagni, Marco; Redaschi, Nicole; Zahn-Zabal, Monique; de Farias, Tarcisio Mendes; Sima, Ana Claudia

Foam Formation in Shake Flasks and Its Consequences

摇瓶中泡沫的形成及其后果

Vonester, David; Hoffmann, Kyra; Palmen, Thomas; Regestein, Lena; Richter, Ulrike; Altenhoff, Anna-Lena; Hoffmann, Maximilian; Radeva, Yulia; Büchs, Jochen; Magnus, Jørgen Barsett

Annotation matters: the effect of structural gene annotation on orthology inference

注释很重要:结构基因注释对直系同源性推断的影响

Prieto-Baños, Silvia; Nevers, Yannis; Altenhoff, Adrian; Warwick Vesztrocy, Alex; Dessimoz, Christophe; Glover, Natasha M

Inference of phylogenetic trees directly from raw sequencing reads using Read2Tree

使用 Read2Tree 直接从原始测序读段推断系统发育树

Dylus, David; Altenhoff, Adrian; Majidian, Sina; Sedlazeck, Fritz J; Dessimoz, Christophe

OMA orthology in 2024: improved prokaryote coverage, ancestral and extant GO enrichment, a revamped synteny viewer and more in the OMA Ecosystem

2024 年 OMA 直系同源性数据库:改进的原核生物覆盖范围、祖先和现存 GO 富集分析、改进的同源性查看器以及 OMA 生态系统中的更多功能

Altenhoff, Adrian M; Warwick Vesztrocy, Alex; Bernard, Charles; Train, Clement-Marie; Nicheperovich, Alina; Prieto Baños, Silvia; Julca, Irene; Moi, David; Nevers, Yannis; Majidian, Sina; Dessimoz, Christophe; Glover, Natasha M

New developments for the Quest for Orthologs benchmark service

Quest for Orthologs 基准服务的新进展

Altenhoff, Adrian; Nevers, Yannis; Tran, Vinh; Jyothi, Dushyanth; Martin, Maria; Cosentino, Salvatore; Majidian, Sina; Marcet-Houben, Marina; Fuentes-Palacios, Diego; Persson, Emma; Walsh, Thomas; Lecompte, Odile; Gabaldón, Toni; Kelly, Steven; Hu, Yanhui; Iwasaki, Wataru; Capella-Gutierrez, Salvador; Dessimoz, Christophe; Thomas, Paul D; Ebersberger, Ingo; Sonnhammer, Erik

DrosOMA: the Drosophila Orthologous Matrix browser

DrosOMA:果蝇直系同源矩阵浏览器

Thiébaut, Antonin; Altenhoff, Adrian M; Campli, Giulia; Glover, Natasha; Dessimoz, Christophe; Waterhouse, Robert M