日期 影响因子
日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:
–

Predicting epistasis across proteins by structural logic

利用结构逻辑预测蛋白质间的上位性

期刊:Proceedings of the National Academy of Sciences of the United States of America
影响因子:9.1
doi:10.1073/pnas.2516291123
Tang, Michelle; Cromie, Gareth A; Kabir, Anowarul; Timour, Martin S; Ashmead, Julee; Lo, Russell S; Corley, Nathaniel; DiMaio, Frank; Morizono, Hiroki; Caldovic, Ljubica; Ah Mew, Nicholas; Gropman, Andrea; Shehu, Amarda; Dudley, Aimée M
发表日期：2026
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Topology-Aware Generation and Activity-Based Filtering: A Computational-Experimental Framework for Data-Scarce Quaternary Ammonium Compound Discovery

拓扑感知生成和基于活动的过滤：一种用于数据稀缺的季铵化合物发现的计算实验框架

期刊:Journal of Chemical Information and Modeling
影响因子:5.3
doi:10.1021/acs.jcim.6c00390
Ghaemi, Shiva; Consylman, Amanda; Pan, Bo; Wu, Alice; Petersen, Ashley; Chang, Gabe; McDonough, Diana; Forman, Mark; Bezold, Elise L; Wuest, William M; Shehu, Amarda; Zhao, Liang; Minbiole, Kevin P C
发表日期：2026
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DyVarMap: Integrating Conformational Dynamics and Interpretable Machine Learning for Cancer-Associated Missense Variant Classification in FGFR2

DyVarMap：整合构象动力学和可解释机器学习，用于FGFR2中与癌症相关的错义变异分类

期刊:Bioengineering-Basel
影响因子:3.8
doi:10.3390/bioengineering13010126
Lian, Yiyang; Shehu, Amarda
肿瘤
FGFR2
肿瘤免疫
发表日期：2026
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DNA breathing integration with deep learning foundational model advances genome-wide binding prediction of human transcription factors

将DNA呼吸作用与深度学习基础模型相结合，推进了人类转录因子的全基因组结合预测。

期刊:Nucleic Acids Research
影响因子:13.1
doi:10.1093/nar/gkae783
Kabir, Anowarul; Bhattarai, Manish; Peterson, Selma; Najman-Licht, Yonatan; Rasmussen, Kim Ø; Shehu, Amarda; Bishop, Alan R; Alexandrov, Boian; Usheva, Anny
发表日期：2024
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Variant Effect Prediction in the Age of Machine Learning

机器学习时代的变异效应预测

期刊:Cold Spring Harbor Perspectives in Biology
影响因子:8.4
doi:10.1101/cshperspect.a041467
Bromberg, Yana; Prabakaran, R; Kabir, Anowarul; Shehu, Amarda
发表日期：2024
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Elucidating the Role of Wildtype and Variant FGFR2 Structural Dynamics in (Dys)Function and Disorder

阐明野生型和变异型FGFR2结构动力学在（功能）失调和紊乱中的作用

期刊:International Journal of Molecular Sciences
影响因子:4.9
doi:10.3390/ijms25084523
Lian, Yiyang; Bodian, Dale; Shehu, Amarda
FGFR2
发表日期：2024
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In the twilight zone of protein sequence homology: do protein language models learn protein structure?

蛋白质序列同源性的灰色地带：蛋白质语言模型能否学习蛋白质结构？

期刊:Bioinformatics Advances
影响因子:2.8
doi:10.1093/bioadv/vbae119
Kabir, Anowarul; Moldwin, Asher; Bromberg, Yana; Shehu, Amarda
发表日期：2024
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Examining DNA breathing with pyDNA-EPBD

使用 pyDNA-EPBD 检查 DNA 呼吸

期刊:Bioinformatics
影响因子:4.4
doi:10.1093/bioinformatics/btad699
Anowarul Kabir, Manish Bhattarai, Kim Ø Rasmussen, Amarda Shehu, Anny Usheva, Alan R Bishop, Boian Alexandrov
信号转导
发表日期：2023
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Examining DNA Breathing with pyDNA-EPBD

使用 pyDNA-EPBD 检查 DNA 呼吸

期刊:
影响因子:
doi:10.1101/2023.09.09.557010
Anowarul Kabir, Manish Bhattarai, Kim Ø Rasmussen, Amarda Shehu, Anny Usheva, Alan R Bishop, Boian S Alexandrov
信号转导
发表日期：2023
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Data Size and Quality Matter: Generating Physically-Realistic Distance Maps of Protein Tertiary Structures

数据规模和质量至关重要：生成蛋白质三级结构的物理真实距离图

期刊:Biomolecules
影响因子:4.8
doi:10.3390/biom12070908
Alam, Fardina Fathmiul; Shehu, Amarda
发表日期：2022
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