日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Genome-wide rules of transcription factor cooperativity revealed through in silico binding site ablation.

通过计算机模拟结合位点消融揭示了全基因组转录因子协同作用的规律

He Xuening, Einarsson Hjörleifur, Páleníková Petra, Rennie Sarah, Hu Dewei, Cui Ruining, Vaagensø Christian, Lage Kasper, Krautz Robert, Andersson Robin

Mapping enhancer-gene regulatory interactions from single-cell data

利用单细胞数据绘制增强子-基因调控相互作用图谱

Sheth, Maya U; Qiu, Wei-Lin; Rosa Ma, X; Gschwind, Andreas R; Jagoda, Evelyn; Tan, Anthony S; Einarsson, Hjörleifur; Gorissen, Bram L; Dubocanin, Danilo; McGinnis, Christopher S; Amgalan, Dulguun; Satpathy, Ansuman T; Jones, Thouis R; Steinmetz, Lars M; Kundaje, Anshul; Ustun, Berk; Engreitz, Jesse M; Andersson, Robin

Molecular convergence of risk variants for congenital heart defects leveraging a regulatory map of the human fetal heart.

利用人类胎儿心脏调控图谱,研究先天性心脏缺陷风险变异的分子趋同性

Ma X Rosa, Conley Stephanie D, Kosicki Michael, Bredikhin Danila, Cui Ran, Tran Steven, Sheth Maya U, Qiu Wei-Lin, Chen Sijie, Kundu Soumya, Kang Helen Y, Amgalan Dulguun, Munger Chad J, Duan Lauren, Dang Katherine, Rubio Oriane Matthys, Kany Shinwan, Zamirpour Siavash, DePaolo John, Padmanabhan Arun, Olgin Jeffrey, Damrauer Scott, Andersson Robin, Gu Mingxia, Priest James R, Quertermous Thomas, Qiu Xiaojie, Rabinovitch Marlene, Visel Axel, Pennacchio Len, Kundaje Anshul, Glass Ian A, Gifford Casey A, Pirruccello James P, Goodyer William R, Engreitz Jesse M

Transcription factor expression is the main determinant of variability in gene co-activity

转录因子表达是基因共活性变异的主要决定因素

van Duin, Lucas; Krautz, Robert; Rennie, Sarah; Andersson, Robin

Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibility

迁移学习可识别细胞类型特异性调控元件可及性的序列决定因素。

Salvatore, Marco; Horlacher, Marc; Marsico, Annalisa; Winther, Ole; Andersson, Robin

Endogenous retroviruses co-opted as divergently transcribed regulatory elements shape the regulatory landscape of embryonic stem cells

内源性逆转录病毒作为反向转录的调控元件,塑造了胚胎干细胞的调控格局。

Bakoulis, Stylianos; Krautz, Robert; Alcaraz, Nicolas; Salvatore, Marco; Andersson, Robin

Comparative transcriptomics of primary cells in vertebrates

脊椎动物原代细胞的比较转录组学

Alam, Tanvir; Agrawal, Saumya; Severin, Jessica; Young, Robert S; Andersson, Robin; Arner, Erik; Hasegawa, Akira; Lizio, Marina; Ramilowski, Jordan A; Abugessaisa, Imad; Ishizu, Yuri; Noma, Shohei; Tarui, Hiroshi; Taylor, Martin S; Lassmann, Timo; Itoh, Masayoshi; Kasukawa, Takeya; Kawaji, Hideya; Marchionni, Luigi; Sheng, Guojun; R R Forrest, Alistair; Khachigian, Levon M; Hayashizaki, Yoshihide; Carninci, Piero; de Hoon, Michiel J L

CAGEfightR: analysis of 5'-end data using R/Bioconductor

CAGEfightR:使用 R/Bioconductor 分析 5' 端数据

Thodberg, Malte; Thieffry, Axel; Vitting-Seerup, Kristoffer; Andersson, Robin; Sandelin, Albin

Transcription start site analysis reveals widespread divergent transcription in D. melanogaster and core promoter-encoded enhancer activities.

转录起始位点分析揭示了果蝇中广泛的发散转录和核心启动子编码的增强子活性

Rennie Sarah, Dalby Maria, Lloret-Llinares Marta, Bakoulis Stylianos, Dalager Vaagensø Christian, Heick Jensen Torben, Andersson Robin

Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease

遗传易感位点上出现的共同活动模式揭示了人类疾病的潜在基因组和细胞结构

Baillie, J Kenneth; Bretherick, Andrew; Haley, Christopher S; Clohisey, Sara; Gray, Alan; Neyton, Lucile P A; Barrett, Jeffrey; Stahl, Eli A; Tenesa, Albert; Andersson, Robin; Brown, J Ben; Faulkner, Geoffrey J; Lizio, Marina; Schaefer, Ulf; Daub, Carsten; Itoh, Masayoshi; Kondo, Naoto; Lassmann, Timo; Kawai, Jun; Mole, Damian; Bajic, Vladimir B; Heutink, Peter; Rehli, Michael; Kawaji, Hideya; Sandelin, Albin; Suzuki, Harukazu; Satsangi, Jack; Wells, Christine A; Hacohen, Nir; Freeman, Thomas C; Hayashizaki, Yoshihide; Carninci, Piero; Forrest, Alistair R R; Hume, David A