日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Analysis of metagenomic data

宏基因组数据分析

Liu, Shaopeng; Rodriguez, Judith S; Munteanu, Viorel; Ronkowski, Cynthia; Sharma, Nitesh Kumar; Alser, Mohammed; Andreace, Francesco; Blekhman, Ran; Błaszczyk, Dagmara; Chikhi, Rayan; Crandall, Keith A; Della Libera, Katja; Francis, Dallace; Frolova, Alina; Gancz, Abigail Shahar; Huntley, Naomi E; Jaiswal, Pooja; Kosciolek, Tomasz; Łabaj, Pawel P; Łabaj, Wojciech; Luan, Tu; Mason, Christopher; Moustafa, Ahmed M; Muralidharan, Harihara Subrahmaniam; Mutlu, Onur; Mansouri Ghiasi, Nika; Rahnavard, Ali; Sun, Fengzhu; Tian, Shuchang; Tierney, Braden T; Van Syoc, Emily; Vicedomini, Riccardo; Zackular, Joseph P; Zelikovsky, Alex; Zielińska, Kinga; Ganda, Erika; Davenport, Emily R; Pop, Mihai; Koslicki, David; Mangul, Serghei

Rapid, accurate long- and short-read mapping to large pangenome graphs with vg Giraffe

使用 vg Giraffe 实现快速、准确的长读和短读比对到大型泛基因组图谱。

Chang, Xian; Novak, Adam M; Eizenga, Jordan M; Sirén, Jouni; Monlong, Jean; Negi, Shloka; Andreace, Francesco; Nag, Sagorika; Kyriakidis, Konstantinos; Hickey, Glenn; Hwang, Stephen; Délot, Emmanuèle C; Carroll, Andrew; Shafin, Kishwar; Chang, Pi-Chuan; Okamoto, Faith; Paten, Benedict

Rapid, accurate long- and short-read mapping to large pangenome graphs with vg Giraffe

使用 vg Giraffe 实现快速、准确的长读和短读比对到大型泛基因组图谱。

Chang, Xian; Novak, Adam M; Eizenga, Jordan M; Sirén, Jouni; Monlong, Jean; Negi, Shloka; Andreace, Francesco; Nag, Sagorika; Kyriakidis, Konstantinos; Hickey, Glenn; Hwang, Stephen; Délot, Emmanuèle C; Carroll, Andrew; Shafin, Kishwar; Chang, Pi-Chuan; Okamoto, Faith; Paten, Benedict

The backpack quotient filter: A dynamic and space-efficient data structure for querying k-mers with abundance

背包商过滤器:一种动态且空间高效的数据结构,用于查询具有丰度的k-mer。

Levallois, Victor; Andreace, Francesco; Le Gal, Bertrand; Dufresne, Yoann; Peterlongo, Pierre

Comparing methods for constructing and representing human pangenome graphs

比较构建和表示人类泛基因组图的方法

Andreace, Francesco; Lechat, Pierre; Dufresne, Yoann; Chikhi, Rayan