日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Emergence and Tandem Repeat-Mediated Elongation of a Translated De Novo Open Reading Frame in Human Oncogenic RNA Gene VPS9D1-AS1 (MYU)

人类致癌RNA基因VPS9D1-AS1(MYU)中翻译的从头开放阅读框的出现和串联重复介导的延伸

Chou, Lin; Cho, Shu-Ting; Lee, Jiwon; Laub, David; Meyer, Douglas; Carter, Hannah; Carvunis, Anne-Ruxandra

Community benchmarking and evaluation of human unannotated microprotein detection by mass spectrometry based proteomics

基于质谱蛋白质组学的人类未注释微蛋白检测的社区基准测试和评估

Wacholder, Aaron; Deutsch, Eric W; Kok, Leron W; van Dinter, Jip T; Lee, Jiwon; Wright, James C; Leblanc, Sebastien; Jayatissa, Ayodya H; Jiang, Kevin; Arefiev, Ihor; Cao, Kevin; Bourassa, Francis; Trifiro, Felix-Antoine; Bassani-Sternberg, Michal; Baranov, Pavel V; Bogaert, Annelies; Chothani, Sonia; Fierro-Monti, Ivo; Fijalkowska, Daria; Gevaert, Kris; Hubner, Norbert; Mudge, Jonathan M; Ruiz-Orera, Jorge; Schulz, Jana; Vizcaíno, Juan Antonio; Prensner, John R; Brunet, Marie A; Martinez, Thomas F; Slavoff, Sarah A; Roucou, Xavier; Choudhary, Jyoti S; van Heesch, Sebastiaan; Moritz, Robert L; Carvunis, Anne-Ruxandra

An expanded reference catalog of translated open reading frames for biomedical research

生物医学研究用翻译开放阅读框的扩展参考目录

Chothani, Sonia; Ruiz-Orera, Jorge; Tierney, Jack A S; Swirski, Michal I; Tjeldnes, Hakon; Kok, Leron W; Clauwaert, Jim; Deutsch, Eric W; Alba, M Mar; Aspden, Julie L; Baranov, Pavel V; Bazzini, Ariel Alejandro; Bruford, Elspeth A; Brunet, Marie A; Cardon, Tristan; Carvunis, Anne-Ruxandra; Casola, Claudio; Choudhary, Jyoti Sharma; Dean, Kellie; Faridi, Pouya; Fierro-Monti, Ivo; Fournier, Isabelle; Frankish, Adam; Gerstein, Mark; Hubner, Norbert; Jiang, Yunzhe; Kellis, Manolis; Martinez, Thomas F; Menschaert, Gerben; Ni, Pengyu; Orchard, Sandra; Roucou, Xavier; Rozowsky, Joel; Salzet, Michel; Siragusa, Mauro; Slavoff, Sarah; Ternette, Nicola; Vizcaino, Juan Antonio; Wacholder, Aaron; Wu, Wei; Xie, Zhi; Yang, Yucheng T; Moritz, Robert L; Valen, Eivind; Mudge, Jonathan; van Heesch, Sebastiaan; Prensner, John R; Rackham, Owen J L

Detection of human unannotated microproteins by mass spectrometry-based proteomics: a community assessment

利用基于质谱的蛋白质组学方法检测人类未注释的微蛋白:一项社区评估

Wacholder, Aaron; Deutsch, Eric W; Kok, Leron W; van Dinter, Jip T; Lee, Jiwon; Wright, James C; Leblanc, Sebastien; Jayatissa, Ayodya H; Jiang, Kevin; Arefiev, Ihor; Cao, Kevin; Bourassa, Francis; Trifiro, Felix-Antoine; Bassani-Sternberg, Michal; Baranov, Pavel V; Bogaert, Annelies; Chothani, Sonia; Fierro-Monti, Ivo; Fijalkowska, Daria; Gevaert, Kris; Hubner, Norbert; Mudge, Jonathan M; Ruiz-Orera, Jorge; Schulz, Jana; Vizcaíno, Juan Antonio; Prensner, John R; Brunet, Marie A; Martinez, Thomas F; Slavoff, Sarah A; Roucou, Xavier; Choudhary, Jyoti S; van Heesch, Sebastiaan; Moritz, Robert L; Carvunis, Anne-Ruxandra

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins

高质量的肽段证据可用于将非典型开放阅读框注释为人类蛋白质

Deutsch, Eric W; Kok, Leron W; Mudge, Jonathan M; Ruiz-Orera, Jorge; Fierro-Monti, Ivo; Sun, Zhi; Abelin, Jennifer G; Alba, M Mar; Aspden, Julie L; Bazzini, Ariel A; Bruford, Elspeth A; Brunet, Marie A; Calviello, Lorenzo; Carr, Steven A; Carvunis, Anne-Ruxandra; Chothani, Sonia; Clauwaert, Jim; Dean, Kellie; Faridi, Pouya; Frankish, Adam; Hubner, Norbert; Ingolia, Nicholas T; Magrane, Michele; Martin, Maria Jesus; Martinez, Thomas F; Menschaert, Gerben; Ohler, Uwe; Orchard, Sandra; Rackham, Owen; Roucou, Xavier; Slavoff, Sarah A; Valen, Eivind; Wacholder, Aaron; Weissman, Jonathan S; Wu, Wei; Xie, Zhi; Choudhary, Jyoti; Bassani-Sternberg, Michal; Vizcaíno, Juan Antonio; Ternette, Nicola; Moritz, Robert L; Prensner, John R; van Heesch, Sebastiaan

Massively integrated coexpression analysis reveals transcriptional regulation, evolution and cellular implications of the yeast noncanonical translatome

大规模整合共表达分析揭示了酵母非经典翻译组的转录调控、进化及其细胞意义。

Rich, April; Acar, Omer; Carvunis, Anne-Ruxandra

Ancestral Sequence Reconstruction as a Tool to Detect and Study De Novo Gene Emergence

祖先序列重建作为检测和研究从头基因出现的工具

Vakirlis, Nikolaos; Acar, Omer; Cherupally, Vijay; Carvunis, Anne-Ruxandra

Integrative detection of genome-wide translation using iRibo

利用iRibo进行全基因组翻译的整合检测

Turcan, Alistair; Lee, Jiwon; Wacholder, Aaron; Carvunis, Anne-Ruxandra

Cellular processing of beneficial de novo emerging proteins

有益新生蛋白质的细胞加工

Carly J Houghton, Nelson Castilho Coelho, Annette Chiang, Stefanie Hedayati, Saurin B Parikh, Nejla Ozbaki-Yagan, Aaron Wacholder, John Iannotta, Alexis Berger, Anne-Ruxandra Carvunis, Allyson F O'Donnell

A vast evolutionarily transient translatome contributes to phenotype and fitness.

庞大的、进化上短暂存在的翻译组对表型和适应性有贡献

Wacholder Aaron, Parikh Saurin Bipin, Coelho Nelson Castilho, Acar Omer, Houghton Carly, Chou Lin, Carvunis Anne-Ruxandra