日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Phosphorothioate DNA modification by BREX type 4 systems in the human gut microbiome

人类肠道微生物组中 BREX 4 型系统介导的硫代磷酸酯 DNA 修饰

Yifeng Yuan,Michael S DeMott,Shane R Byrne,Katia Flores,Mathilde Poyet,Mathieu Groussin,Brittany Berdy,John Rusine Bahunde,Catherine Girard,Jenni Lehtimäki,Audax Z P Mabulla,Ivan Emil Mwikarago,Yvonne Ayerki Nartey,Le Thanh Tu Nguyen,Charles A Onyekwere,Lewis R Roberts,B Jesse Shapiro,Tommi Vatanen,Laurie E Comstock,Eric J Alm,Peter C Dedon

Species-specific prophage induction by ciprofloxacin in human gut metagenomes

环丙沙星在人类肠道宏基因组中诱导物种特异性前噬菌体

Sakdinan, Ben; Sinha, Anshul; Qadri, Firdausi; Khan, Ashraful I; Nelson, Eric J; Shapiro, B Jesse

Prevalent chromosome fusion in Vibrio cholerae O1

霍乱弧菌O1中普遍存在染色体融合现象

Cuénod, Aline; Chac, Denise; Khan, Ashraful I; Chowdhury, Fahima; Hyppa, Randy W; Markiewicz, Susan M; Rice, Amelia; Kholwadwala, Akhil; Calderwood, Stephen B; Ryan, Edward T; Harris, Jason B; LaRocque, Regina C; Bhuiyan, Taufiqur R; Smith, Gerald R; Qadri, Firdausi; Lypaczewski, Patrick; Weil, Ana A; Shapiro, B Jesse

Vibrio cholerae lineage and pangenome diversity vary geographically across Bangladesh over 1 year

霍乱弧菌谱系和泛基因组多样性在孟加拉国各地一年内存在地域差异。

Qin, Chuhan; Lypaczewski, Patrick; Sayeed, Md Abu; Cuénod, Aline; Brinkley, Lindsey; Creasy-Marrazzo, Ashton; Cato, Emilee T; Islam, Kamrul; Khabir, Md Imam Ul; Bhuiyan, Md Taufiqur R; Begum, Yasmin; Kamat, Manasi N; Bailey, Laura S; Basso, Kari B; Qadri, Firdausi; Khan, Ashraful I; Nelson, Eric J; Shapiro, B Jesse

Within-host genetic diversity of SARS-CoV-2 across animal species

动物物种中SARS-CoV-2的宿主内遗传多样性

Naderi, Sana; Sagan, Selena M; Shapiro, B Jesse

Environmental RNA-Based Metatranscriptomics as a Novel Biomonitoring Tool: A Case Study of Glyphosate-Based Herbicide Effects on Freshwater Eukaryotic Communities

基于环境RNA的宏转录组学作为一种新型生物监测工具:以草甘膦类除草剂对淡水真核生物群落的影响为例

He, Xiaoping; Maruki, Takahiro; Morgado-Gamero, Wendy B; Barrett, Rowan D H; Fugère, Vincent; Fussmann, Gregor F; Gonzalez, Andrew; Shapiro, B Jesse; Cristescu, Melania E

Clinical and environmental wastewater-based bacteriophage surveillance for high-impact diarrheal diseases, including cholera, in Bangladesh

在孟加拉国开展基于临床和环境废水的噬菌体监测,以检测包括霍乱在内的高影响腹泻疾病。

Akhtar, Marjahan; Amin, Md Ariful; Hussain, Subah Nuzhat; Nafsi, Nazia Nazrul; Parvin, Nasrin; Khanam, Farhana; Islam, Md Taufiqul; Bhuiyan, Md Amirul Islam; Afroz, Rahima; Firoj, Md Golam; Chowdhury, Fahima; Khan, Ashraful Islam; Jubair, Mohammad; Ryan, Edward T; Shapiro, B Jesse; Thomson, Nicholas R; Nelson, Eric J; Rahman, Md Mustafizur; Begum, Yasmin Ara; Bhuiyan, Taufiqur Rahman; Qadri, Firdausi

Industrialization drives convergent microbial and physiological shifts in the human metaorganism

工业化驱动人类超有机体中微生物和生理的趋同变化

Poyet, Mathilde; Rühlemann, Malte; Schaan, Ana P; Ma, Yue; Moitinho-Silva, Lucas; Wacker, Eike M; Jebens, Hannah; Patel, Lucas; Nguyen, Le Thanh Tu; Zimmer, Alexis; Plichta, Damian; McDonald, Daniel; Stevens, Christine; Agyei, Adwoa; Afihene, Mary Y; Asibey, Shadrack O; Awuku, Yaw A; Badiane, Aida S; Ching, Lee S; Corzett, Chris; Deme, Awa; Dominguez-Rodrigo, Manuel; Duah, Amoako; Fezeu, Alain; Froment, Alain; Gibbons, Sean; Girard, Catherine; Hooker, Jeff; Ibrahim, Fatimah; Iqaluk, Deborah; Juimo, Vanessa; Kettunen, Pinja; Lafosse, Sophie; Lango-Yaya, Ernest; Lehtimäki, Jenni; Lim, Yvonne A L; Mabulla, Audax; Mahachai, Varocha; Mohamed, Rihlat S; Moniz, Katya; Mwikarago, Ivan E; Nartey, Yvonne A; Ndiaye, Daouda; Noel, Mary; Onyekwere, Charles; Pin, Tan M; Plymoth, Amelie; Roberts, Lewis; Ruokolainen, Lasse; Rusine, John; Segurel, Laure; Shapiro, B Jesse; Sigwazi, Shani; Sistiaga, Ainara; Valles, Kenneth; Vatanen, Tommi; Vilaichone, Ratha-Korn; Rosenstiel, Philip; Baines, John; Franke, Andre; Ellinghaus, David; Knight, Rob; Daly, Mark; Xavier, Ramnik J; Alm, Eric J; Groussin, Mathieu

Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data

利用模拟基因组数据追踪废水中值得关注的SARS-CoV-2变异株:对九种计算工具的评估

Sutcliffe, Steven G; Kraemer, Susanne A; Ellmen, Isaac; Knapp, Jennifer J; Overton, Alyssa K; Nash, Delaney; Nissimov, Jozef I; Charles, Trevor C; Dreifuss, David; Topolsky, Ivan; Baykal, Pelin I; Fuhrmann, Lara; Jablonski, Kim P; Beerenwinkel, Niko; Levy, Joshua I; Olabode, Abayomi S; Becker, Devan G; Gugan, Gopi; Brintnell, Erin; Poon, Art F Y; Valieris, Renan; Drummond, Rodrigo D; Defelicibus, Alexandre; Dias-Neto, Emmanuel; Rosales, Rafael A; Tojal da Silva, Israel; Orfanou, Aspasia; Psomopoulos, Fotis; Pechlivanis, Nikolaos; Pipes, Lenore; Chen, Zihao; Baaijens, Jasmijn A; Baym, Michael; Shapiro, B Jesse

The Canadian VirusSeq Data Portal and Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology

加拿大病毒测序数据门户网站和多唐:SARS-CoV-2病毒序列和基因组流行病学的开放资源

Gill, Erin E; Jia, Baofeng; Murall, Carmen Lia; Poujol, Raphaël; Anwar, Muhammad Zohaib; John, Nithu Sara; Richardsson, Justin; Hobb, Ashley; Olabode, Abayomi S; Lepsa, Alexandru; Duggan, Ana T; Tyler, Andrea D; N'Guessan, Arnaud; Kachru, Atul; Chan, Brandon; Yoshida, Catherine; Yung, Christina K; Bujold, David; Andric, Dusan; Su, Edmund; Griffiths, Emma J; Van Domselaar, Gary; Jolly, Gordon W; Ward, Heather K E; Feher, Henrich; Baker, Jared; Simpson, Jared T; Uddin, Jaser; Ragoussis, Jiannis; Eubank, Jon; Fritz, Jörg H; Gálvez, José Héctor; Fang, Karen; Cullion, Kim; Rivera, Leonardo; Xiang, Linda; Croxen, Matthew A; Shiell, Mitchell; Prystajecky, Natalie; Quirion, Pierre-Olivier; Bajari, Rosita; Rich, Samantha; Mubareka, Samira; Moreira, Sandrine; Cain, Scott; Sutcliffe, Steven G; Kraemer, Susanne A; Alturmessov, Yelizar; Joly, Yann; Cphln Consortium; CanCOGeN Consortium; VirusSeq Data Portal Academic And Health Network; Fiume, Marc; Snutch, Terrance P; Bell, Cindy; Lopez-Correa, Catalina; Hussin, Julie G; Joy, Jeffrey B; Colijn, Caroline; Gordon, Paul M K; Hsiao, William W L; Poon, Art F Y; Knox, Natalie C; Courtot, Mélanie; Stein, Lincoln; Otto, Sarah P; Bourque, Guillaume; Shapiro, B Jesse; Brinkman, Fiona S L