日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

sCellST predicts single-cell gene expression from H& E images

sCellST可根据H&E图像预测单细胞基因表达。

Chadoutaud, Loïc; Lerousseau, Marvin; Herrero-Saboya, Daniel; Ostermaier, Julian; Fontugne, Jacqueline; Barillot, Emmanuel; Walter, Thomas

Integration of clinical, pathological, radiological, and transcriptomic data improves prediction for first-line immunotherapy outcome in metastatic non-small cell lung cancer

整合临床、病理、放射学和转录组学数据可提高转移性非小细胞肺癌一线免疫治疗疗效的预测准确性

Captier, Nicolas; Lerousseau, Marvin; Orlhac, Fanny; Hovhannisyan-Baghdasarian, Narinée; Luporsi, Marie; Woff, Erwin; Lagha, Sarah; Salamoun Feghali, Paulette; Lonjou, Christine; Beaulaton, Clément; Zinovyev, Andrei; Salmon, Hélène; Walter, Thomas; Buvat, Irène; Girard, Nicolas; Barillot, Emmanuel

NeKo: A tool for automatic network construction from prior knowledge

NeKo:一种利用先验知识自动构建网络的工具

Ruscone, Marco; Tsirvouli, Eirini; Checcoli, Andrea; Turei, Denes; Barillot, Emmanuel; Saez-Rodriguez, Julio; Martignetti, Loredana; Flobak, Åsmund; Calzone, Laurence

Author Correction: Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms

作者更正:系统医学疾病图谱:社区驱动的疾病机制综合表征

Mazein, Alexander; Ostaszewski, Marek; Kuperstein, Inna; Watterson, Steven; Le Novère, Nicolas; Lefaudeux, Diane; De Meulder, Bertrand; Pellet, Johann; Balaur, Irina; Saqi, Mansoor; Nogueira, Maria Manuela; HeFeng, Feng Q; Parton, Andrew; Lemonnier, Nathanaël; Gawron, Piotr; Gebel, Stephan; Hainaut, Pierre; Ollert, Markus; Dogrusoz, Ugur; Barillot, Emmanuel; Zinovyev, Andrei; Schneider, Reinhard; Balling, Rudi; Auffray, Charles

Identification of Interpretable Clusters and Associated Signatures in Breast Cancer Single-Cell Data: A Topic Modeling Approach

基于主题建模方法的乳腺癌单细胞数据中可解释聚类及其相关特征的识别

Malagoli, Gabriele; Valle, Filippo; Barillot, Emmanuel; Caselle, Michele; Martignetti, Loredana

Maboss for HPC environments: implementations of the continuous time Boolean model simulator for large CPU clusters and GPU accelerators

面向高性能计算环境的Maboss:适用于大型CPU集群和GPU加速器的连续时间布尔模型模拟器的实现

Šmelko, Adam; Kratochvíl, Miroslav; Barillot, Emmanuel; Noël, Vincent

Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches

利用计算系统生物学方法识别 COVID-19 疾病机制中的药物靶点

Niarakis, Anna; Ostaszewski, Marek; Mazein, Alexander; Kuperstein, Inna; Kutmon, Martina; Gillespie, Marc E; Funahashi, Akira; Acencio, Marcio Luis; Hemedan, Ahmed; Aichem, Michael; Klein, Karsten; Czauderna, Tobias; Burtscher, Felicia; Yamada, Takahiro G; Hiki, Yusuke; Hiroi, Noriko F; Hu, Finterly; Pham, Nhung; Ehrhart, Friederike; Willighagen, Egon L; Valdeolivas, Alberto; Dugourd, Aurelien; Messina, Francesco; Esteban-Medina, Marina; Peña-Chilet, Maria; Rian, Kinza; Soliman, Sylvain; Aghamiri, Sara Sadat; Puniya, Bhanwar Lal; Naldi, Aurélien; Helikar, Tomáš; Singh, Vidisha; Fernández, Marco Fariñas; Bermudez, Viviam; Tsirvouli, Eirini; Montagud, Arnau; Noël, Vincent; Ponce-de-Leon, Miguel; Maier, Dieter; Bauch, Angela; Gyori, Benjamin M; Bachman, John A; Luna, Augustin; Piñero, Janet; Furlong, Laura I; Balaur, Irina; Rougny, Adrien; Jarosz, Yohan; Overall, Rupert W; Phair, Robert; Perfetto, Livia; Matthews, Lisa; Rex, Devasahayam Arokia Balaya; Orlic-Milacic, Marija; Gomez, Luis Cristobal Monraz; De Meulder, Bertrand; Ravel, Jean Marie; Jassal, Bijay; Satagopam, Venkata; Wu, Guanming; Golebiewski, Martin; Gawron, Piotr; Calzone, Laurence; Beckmann, Jacques S; Evelo, Chris T; D'Eustachio, Peter; Schreiber, Falk; Saez-Rodriguez, Julio; Dopazo, Joaquin; Kuiper, Martin; Valencia, Alfonso; Wolkenhauer, Olaf; Kitano, Hiroaki; Barillot, Emmanuel; Auffray, Charles; Balling, Rudi; Schneider, Reinhard

Corrigendum to "Modeling signaling pathways in biology with MaBoSS: From one single cell to a dynamic population of heterogeneous interacting cells" [Comput. Struct. Biotechnol. 20 (2022) 5661-5671]

对“使用 MaBoSS 对生物学中的信号通路进行建模:从单个细胞到异质相互作用细胞的动态群体”[Comput. Struct. Biotechnol. 20 (2022) 5661-5671]的更正

Calzone, Laurence; Noël, Vincent; Barillot, Emmanuel; Kroemer, Guido; Stoll, Gautier

PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks

PhysiBoSS 2.0:随机布尔建模框架和基于代理的建模框架的可持续集成

Ponce-de-Leon, Miguel; Montagud, Arnau; Noël, Vincent; Meert, Annika; Pradas, Gerard; Barillot, Emmanuel; Calzone, Laurence; Valencia, Alfonso

Multiscale model of the different modes of cancer cell invasion

癌细胞侵袭不同模式的多尺度模型

Ruscone, Marco; Montagud, Arnau; Chavrier, Philippe; Destaing, Olivier; Bonnet, Isabelle; Zinovyev, Andrei; Barillot, Emmanuel; Noël, Vincent; Calzone, Laurence