日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Modeling Protein-Protein and Protein-Ligand Interactions by the ClusPro Team in CASP16

ClusPro团队在CASP16中对蛋白质-蛋白质和蛋白质-配体相互作用进行了建模

Ashizawa, Ryota; Kotelnikov, Sergei; Khan, Omeir; Li, Stan Xiaogang; Glukhov, Ernest; Cao, Xin; Lazou, Maria; Bekar-Cesaretli, Ayse; Hailegeorgis, Derara; Averkava, Veranika; Zhu, Yimin; Jones, George; Yu, Hao; Kalitin, Dmytro; Stepanenko, Darya; Koirala, Kushal; Patsahan, Taras; Beglov, Dmitri; Lukin, Mark; Joseph-McCarthy, Diane; Simmerling, Carlos; Tropsha, Alexander; Coutsias, Evangelos; Dill, Ken A; Padhorny, Dzmitry; Vajda, Sandor; Kozakov, Dima

E-FTMap: A Protein Structure Based Pharmacophore Identification Server for Guiding Fragment Expansion

E-FTMap:基于蛋白质结构的药效团识别服务器,用于指导片段扩展

Khan, Omeir; Jones, George; Kozakov, Dima; Beglov, Dmitri; Joseph-McCarthy, Diane; Vajda, Sandor

An ALPK3 truncation variant causing autosomal dominant hypertrophic cardiomyopathy is partially rescued by mavacamten

mavacamten 可部分挽救导致常染色体显性肥厚型心肌病的 ALPK3 截短变异体。

Leinhos, Lisa; Robinson, Paul; Poloni, Giulia; Broadway-Stringer, Sophie; Beglov, Julia; Lokman, Adam B; Douglas, Gillian; Nuthay, Sajjad; Fonseka, Oveena; Schmid, Manuel; Singer, Evie; Hooper, Charlotte; Thomson, Kate; Bagnall, Richard D; Ingles, Jodie; Semsarian, Christopher; Ormondroyd, Elizabeth; Toepfer, Christopher N; Davies, Benjamin; Redwood, Charles; Watkins, Hugh; Gehmlich, Katja

Expanding FTMap for Fragment-Based Identification of Pharmacophore Regions in Ligand Binding Sites

扩展 FTMap 用于基于片段的配体结合位点药效团区域识别

Khan, Omeir; Jones, George; Lazou, Maria; Joseph-McCarthy, Diane; Kozakov, Dima; Beglov, Dmitri; Vajda, Sandor

The ClusPro AbEMap web server for the prediction of antibody epitopes

ClusPro AbEMap 网络服务器用于预测抗体表位

Desta, Israel T; Kotelnikov, Sergei; Jones, George; Ghani, Usman; Abyzov, Mikhail; Kholodov, Yaroslav; Standley, Daron M; Beglov, Dmitri; Vajda, Sandor; Kozakov, Dima

High Accuracy Prediction of PROTAC Complex Structures

PROTAC复合物结构的高精度预测

Ignatov, Mikhail; Jindal, Akhil; Kotelnikov, Sergei; Beglov, Dmitri; Posternak, Ganna; Tang, Xiaojing; Maisonneuve, Pierre; Poda, Gennady; Batey, Robert A; Sicheri, Frank; Whitty, Adrian; Tonge, Peter J; Vajda, Sandor; Kozakov, Dima

Impact of AlphaFold on structure prediction of protein complexes: The CASP15-CAPRI experiment

AlphaFold对蛋白质复合物结构预测的影响:CASP15-CAPRI实验

Lensink, Marc F; Brysbaert, Guillaume; Raouraoua, Nessim; Bates, Paul A; Giulini, Marco; Honorato, Rodrigo V; van Noort, Charlotte; Teixeira, Joao M C; Bonvin, Alexandre M J J; Kong, Ren; Shi, Hang; Lu, Xufeng; Chang, Shan; Liu, Jian; Guo, Zhiye; Chen, Xiao; Morehead, Alex; Roy, Raj S; Wu, Tianqi; Giri, Nabin; Quadir, Farhan; Chen, Chen; Cheng, Jianlin; Del Carpio, Carlos A; Ichiishi, Eichiro; Rodriguez-Lumbreras, Luis A; Fernandez-Recio, Juan; Harmalkar, Ameya; Chu, Lee-Shin; Canner, Sam; Smanta, Rituparna; Gray, Jeffrey J; Li, Hao; Lin, Peicong; He, Jiahua; Tao, Huanyu; Huang, Sheng-You; Roel-Touris, Jorge; Jimenez-Garcia, Brian; Christoffer, Charles W; Jain, Anika J; Kagaya, Yuki; Kannan, Harini; Nakamura, Tsukasa; Terashi, Genki; Verburgt, Jacob C; Zhang, Yuanyuan; Zhang, Zicong; Fujuta, Hayato; Sekijima, Masakazu; Kihara, Daisuke; Khan, Omeir; Kotelnikov, Sergei; Ghani, Usman; Padhorny, Dzmitry; Beglov, Dmitri; Vajda, Sandor; Kozakov, Dima; Negi, Surendra S; Ricciardelli, Tiziana; Barradas-Bautista, Didier; Cao, Zhen; Chawla, Mohit; Cavallo, Luigi; Oliva, Romina; Yin, Rui; Cheung, Melyssa; Guest, Johnathan D; Lee, Jessica; Pierce, Brian G; Shor, Ben; Cohen, Tomer; Halfon, Matan; Schneidman-Duhovny, Dina; Zhu, Shaowen; Yin, Rujie; Sun, Yuanfei; Shen, Yang; Maszota-Zieleniak, Martyna; Bojarski, Krzysztof K; Lubecka, Emilia A; Marcisz, Mateusz; Danielsson, Annemarie; Dziadek, Lukasz; Gaardlos, Margrethe; Gieldon, Artur; Liwo, Adam; Samsonov, Sergey A; Slusarz, Rafal; Zieba, Karolina; Sieradzan, Adam K; Czaplewski, Cezary; Kobayashi, Shinpei; Miyakawa, Yuta; Kiyota, Yasuomi; Takeda-Shitaka, Mayuko; Olechnovic, Kliment; Valancauskas, Lukas; Dapkunas, Justas; Venclovas, Ceslovas; Wallner, Bjorn; Yang, Lin; Hou, Chengyu; He, Xiaodong; Guo, Shuai; Jiang, Shenda; Ma, Xiaoliang; Duan, Rui; Qui, Liming; Xu, Xianjin; Zou, Xiaoqin; Velankar, Sameer; Wodak, Shoshana J

Mapping of antibody epitopes based on docking and homology modeling

基于分子对接和同源建模的抗体表位定位

Desta, Israel T; Kotelnikov, Sergei; Jones, George; Ghani, Usman; Abyzov, Mikhail; Kholodov, Yaroslav; Standley, Daron M; Sabitova, Maria; Beglov, Dmitri; Vajda, Sandor; Kozakov, Dima

Functional analysis of a gene-edited mouse model to gain insights into the disease mechanisms of a titin missense variant

对基因编辑小鼠模型进行功能分析,以深入了解肌联蛋白错义变异的致病机制

Jiang, He; Hooper, Charlotte; Kelly, Matthew; Steeples, Violetta; Simon, Jillian N; Beglov, Julia; Azad, Amar J; Leinhos, Lisa; Bennett, Pauline; Ehler, Elisabeth; Kalisch-Smith, Jacinta I; Sparrow, Duncan B; Fischer, Roman; Heilig, Raphael; Isackson, Henrik; Ehsan, Mehroz; Patone, Giannino; Huebner, Norbert; Davies, Benjamin; Watkins, Hugh; Gehmlich, Katja

Benchmark Sets for Binding Hot Spot Identification in Fragment-Based Ligand Discovery

基于片段的配体发现中结合热点识别的基准数据集

Wakefield, Amanda E; Yueh, Christine; Beglov, Dmitri; Castilho, Marcelo S; Kozakov, Dima; Keserű, György M; Whitty, Adrian; Vajda, Sandor