日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Upcycling human excrement: the gut microbiome to soil microbiome axis

人类粪便的升级再造:肠道微生物群到土壤微生物群的轴

Meilander, Jeff; Herman, Chloe; Manley, Andrew; Augustine, Georgia; Birdsell, Dawn; Bolyen, Evan; Celona, Kimberly R; Coffey, Hayden; Cocking, Jill; Donoghue, Teddy; Draves, Alexis; Erickson, Daryn; Foley, Marissa; Gehret, Liz; Hagen, Johannah; Hepp, Crystal; Ingram, Parker; John, David; Kadar, Katarina; Keim, Paul; Lloyd, Victoria; Osterink, Christina; Monsaint-Queeney, Victoria; Ramirez, Diego; Romero, Antonio; Ruby, Megan C; Sahl, Jason W; Soloway, Sydni; Stone, Nathan E; Trottier, Shannon; Van Orden, Kaleb; Painter, Alexis; Wallace, Sam; Wilcox, Larissa; Wood, Colin V; Yancey, Jaiden; Caporaso, J Gregory

Assessing microbiome engraftment extent following fecal microbiota transplant with q2-fmt

利用q2-fmt评估粪便微生物移植后微生物组的植入程度

Herman, Chloe; Bolyen, Evan; Simard, Anthony; Gehret, Liz; Caporaso, J Gregory

MOSHPIT: accessible, reproducible metagenome data science on the QIIME 2 framework

MOSHPIT:基于 QIIME 2 框架的可访问、可复现的宏基因组数据科学

Ziemski, Michal; Gehret, Liz; Simard, Anthony; Dau, Santiago Castro; Risch, Vinzent; Grabocka, Doriela; Matzoros, Christos; Wood, Colin; Cabrera, Paula Momo; Hernández-Velázquez, Rodrigo; Herman, Chloe; Evans, Keegan; Robeson, Michael S 2nd; Bolyen, Evan; Caporaso, J Gregory; Bokulich, Nicholas A

Facilitating bootstrapped and rarefaction-based microbiome diversity analysis with q2-boots

利用 q2-boots 促进基于自举和稀疏化的微生物组多样性分析

Raspet, Isaiah; Gehret, Elizabeth; Herman, Chloe; Meilander, Jeff; Manley, Andrew; Simard, Anthony; Bolyen, Evan; Caporaso, J Gregory

Predicting Neurodegenerative Disease Using Prepathology Gut Microbiota Composition: a Longitudinal Study in Mice Modeling Alzheimer's Disease Pathologies

利用病理前肠道菌群组成预测神经退行性疾病:一项模拟阿尔茨海默病病理的小鼠纵向研究

Borsom, Emily M; Conn, Kathryn; Keefe, Christopher R; Herman, Chloe; Orsini, Gabrielle M; Hirsch, Allyson H; Palma Avila, Melanie; Testo, George; Jaramillo, Sierra A; Bolyen, Evan; Lee, Keehoon; Caporaso, J Gregory; Cope, Emily K

Facilitating bioinformatics reproducibility with QIIME 2 Provenance Replay

利用 QIIME 2 Provenance Replay 促进生物信息学结果的可重复性

Keefe, Christopher R; Dillon, Matthew R; Gehret, Elizabeth; Herman, Chloe; Jewell, Mary; Wood, Colin V; Bolyen, Evan; Caporaso, J Gregory

Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops

两次虚拟实践型微生物组生物信息学研讨会的经验和教训

Dillon, Matthew R; Bolyen, Evan; Adamov, Anja; Belk, Aeriel; Borsom, Emily; Burcham, Zachary; Debelius, Justine W; Deel, Heather; Emmons, Alex; Estaki, Mehrbod; Herman, Chloe; Keefe, Christopher R; Morton, Jamie T; Oliveira, Renato R M; Sanchez, Andrew; Simard, Anthony; Vázquez-Baeza, Yoshiki; Ziemski, Michal; Miwa, Hazuki E; Kerere, Terry A; Coote, Carline; Bonneau, Richard; Knight, Rob; Oliveira, Guilherme; Gopalasingam, Piraveen; Kaehler, Benjamin D; Cope, Emily K; Metcalf, Jessica L; Robeson Ii, Michael S; Bokulich, Nicholas A; Caporaso, J Gregory

QIIME 2 Enables Comprehensive End-to-End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data

QIIME 2 可对多种微生物组数据进行全面的端到端分析,并与公开数据进行比较研究。

Estaki, Mehrbod; Jiang, Lingjing; Bokulich, Nicholas A; McDonald, Daniel; González, Antonio; Kosciolek, Tomasz; Martino, Cameron; Zhu, Qiyun; Birmingham, Amanda; Vázquez-Baeza, Yoshiki; Dillon, Matthew R; Bolyen, Evan; Caporaso, J Gregory; Knight, Rob

Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity

在时间、地域和病毒多样性方面对SARS-CoV-2基因组进行可重复采样

Bolyen, Evan; Dillon, Matthew R; Bokulich, Nicholas A; Ladner, Jason T; Larsen, Brendan B; Hepp, Crystal M; Lemmer, Darrin; Sahl, Jason W; Sanchez, Andrew; Holdgraf, Chris; Sewell, Chris; Choudhury, Aakash G; Stachurski, John; McKay, Matthew; Simard, Anthony; Engelthaler, David M; Worobey, Michael; Keim, Paul; Caporaso, J Gregory

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

利用QIIME 2实现可复现、交互式、可扩展和可扩展的微生物组数据科学

Bolyen, Evan; Rideout, Jai Ram; Dillon, Matthew R; Bokulich, Nicholas A; Abnet, Christian C; Al-Ghalith, Gabriel A; Alexander, Harriet; Alm, Eric J; Arumugam, Manimozhiyan; Asnicar, Francesco; Bai, Yang; Bisanz, Jordan E; Bittinger, Kyle; Brejnrod, Asker; Brislawn, Colin J; Brown, C Titus; Callahan, Benjamin J; Caraballo-Rodríguez, Andrés Mauricio; Chase, John; Cope, Emily K; Da Silva, Ricardo; Diener, Christian; Dorrestein, Pieter C; Douglas, Gavin M; Durall, Daniel M; Duvallet, Claire; Edwardson, Christian F; Ernst, Madeleine; Estaki, Mehrbod; Fouquier, Jennifer; Gauglitz, Julia M; Gibbons, Sean M; Gibson, Deanna L; Gonzalez, Antonio; Gorlick, Kestrel; Guo, Jiarong; Hillmann, Benjamin; Holmes, Susan; Holste, Hannes; Huttenhower, Curtis; Huttley, Gavin A; Janssen, Stefan; Jarmusch, Alan K; Jiang, Lingjing; Kaehler, Benjamin D; Kang, Kyo Bin; Keefe, Christopher R; Keim, Paul; Kelley, Scott T; Knights, Dan; Koester, Irina; Kosciolek, Tomasz; Kreps, Jorden; Langille, Morgan G I; Lee, Joslynn; Ley, Ruth; Liu, Yong-Xin; Loftfield, Erikka; Lozupone, Catherine; Maher, Massoud; Marotz, Clarisse; Martin, Bryan D; McDonald, Daniel; McIver, Lauren J; Melnik, Alexey V; Metcalf, Jessica L; Morgan, Sydney C; Morton, Jamie T; Naimey, Ahmad Turan; Navas-Molina, Jose A; Nothias, Louis Felix; Orchanian, Stephanie B; Pearson, Talima; Peoples, Samuel L; Petras, Daniel; Preuss, Mary Lai; Pruesse, Elmar; Rasmussen, Lasse Buur; Rivers, Adam; Robeson, Michael S 2nd; Rosenthal, Patrick; Segata, Nicola; Shaffer, Michael; Shiffer, Arron; Sinha, Rashmi; Song, Se Jin; Spear, John R; Swafford, Austin D; Thompson, Luke R; Torres, Pedro J; Trinh, Pauline; Tripathi, Anupriya; Turnbaugh, Peter J; Ul-Hasan, Sabah; van der Hooft, Justin J J; Vargas, Fernando; Vázquez-Baeza, Yoshiki; Vogtmann, Emily; von Hippel, Max; Walters, William; Wan, Yunhu; Wang, Mingxun; Warren, Jonathan; Weber, Kyle C; Williamson, Charles H D; Willis, Amy D; Xu, Zhenjiang Zech; Zaneveld, Jesse R; Zhang, Yilong; Zhu, Qiyun; Knight, Rob; Caporaso, J Gregory