日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

A searchable metadata network graph for microbiome metabolomics

微生物组代谢组学的可搜索元数据网络图

Charron-Lamoureux, Vincent; Xing, Shipei; Patan, Abubaker; Walker, Corinn; Monter, Ricardo-Almada; Abiead, Yasin El; Zhao, Haoqi Nina; Patel, Lucas; Weng, Yuhan; Gonzalez, Antonio; Ackermann, Gail; Deleray, Victoria; Gandhi, Vishant; Mohanty, Ipsita; Caraballo-Rodriguez, Andres Mauricio; Kvitne, Kine Eide; Zuffa, Simone; Norman, Annabelle; Martin, Anthony; Chin, Loryn; Paz-Gonzalez, Rocio; Sala-Climent, Marta; Suryawinata, Nadia; Zemlin, Jasmine; Gouda, Harsha; Hu, Zhewen; Norton, Grant; Rajkumar, Prajit; Molina, Anthony Ja; Bergstrom, Jaclyn; Pinner, Monae; Giddings, Sadie; Aron, Allegra T; Liang, Liang; Dahesh, Samira; Lamichhane, Santosh; Reilly, Erin R; Nizet, Victor; Skrip, Anna; Lukowski, April L; Shore, Selene F H; Ghoshal, Subhomitra; Engevik, Melinda A; Horvath, Thomas D; Renwick, Simone; Agongo, Julius; Marco, Maria L; Mazmanian, Sarkis K; Wang, Mingxun; Yang, Heejung; McDonald, Daniel; Guma, Monica; Stegmann, Evi; Hernandez Perez, Naybel; Stincone, Paolo; Kemen, Eric; Pakkir Shah, Abzer Kelminal; Bode, Lars; Petras, Daniel; Siegel, Dionicio; Raffatellu, Manuela; Patterson, Andrew D; Devkota, Suzanne; Jinich, Adrian; Knight, Rob; Zengler, Karsten; Dorrestein, Pieter C

Discovery of metabolites prevails amid in-source fragmentation

代谢物的发现是在源内碎片化过程中普遍存在的

El Abiead, Yasin; Rutz, Adriano; Zuffa, Simone; Amer, Bashar; Xing, Shipei; Brungs, Corinna; Schmid, Robin; Correia, Mario S P; Caraballo-Rodriguez, Andres Mauricio; Zarrinpar, Amir; Mannochio-Russo, Helena; Witting, Michael; Mohanty, Ipsita; Pluskal, Tomáš; Bittremieux, Wout; Knight, Rob; Patterson, Andrew D; van der Hooft, Justin J J; Böcker, Sebastian; Dunn, Warwick B; Linington, Roger G; Wishart, David S; Wolfender, Jean-Luc; Fiehn, Oliver; Zamboni, Nicola; Dorrestein, Pieter C

Enabling pan-repository reanalysis for big data science of public metabolomics data

为公共代谢组学数据的大数据科学实现跨存储库的重新分析

El Abiead, Yasin; Strobel, Michael; Payne, Thomas; Fahy, Eoin; O'Donovan, Claire; Subramamiam, Shankar; Vizcaíno, Juan Antonio; Yurekten, Ozgur; Deleray, Victoria; Zuffa, Simone; Xing, Shipei; Mannochio-Russo, Helena; Mohanty, Ipsita; Zhao, Haoqi Nina; Caraballo-Rodriguez, Andres M; P Gomes, Paulo Wender; Avalon, Nicole E; Northen, Trent R; Bowen, Benjamin P; Louie, Katherine B; Dorrestein, Pieter C; Wang, Mingxun

microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data

microbeMASST:一种基于分类信息的微生物代谢组学数据质谱搜索工具

Zuffa, Simone; Schmid, Robin; Bauermeister, Anelize; P Gomes, Paulo Wender; Caraballo-Rodriguez, Andres M; El Abiead, Yasin; Aron, Allegra T; Gentry, Emily C; Zemlin, Jasmine; Meehan, Michael J; Avalon, Nicole E; Cichewicz, Robert H; Buzun, Ekaterina; Terrazas, Marvic Carrillo; Hsu, Chia-Yun; Oles, Renee; Ayala, Adriana Vasquez; Zhao, Jiaqi; Chu, Hiutung; Kuijpers, Mirte C M; Jackrel, Sara L; Tugizimana, Fidele; Nephali, Lerato Pertunia; Dubery, Ian A; Madala, Ntakadzeni Edwin; Moreira, Eduarda Antunes; Costa-Lotufo, Leticia Veras; Lopes, Norberto Peporine; Rezende-Teixeira, Paula; Jimenez, Paula C; Rimal, Bipin; Patterson, Andrew D; Traxler, Matthew F; Pessotti, Rita de Cassia; Alvarado-Villalobos, Daniel; Tamayo-Castillo, Giselle; Chaverri, Priscila; Escudero-Leyva, Efrain; Quiros-Guerrero, Luis-Manuel; Bory, Alexandre Jean; Joubert, Juliette; Rutz, Adriano; Wolfender, Jean-Luc; Allard, Pierre-Marie; Sichert, Andreas; Pontrelli, Sammy; Pullman, Benjamin S; Bandeira, Nuno; Gerwick, William H; Gindro, Katia; Massana-Codina, Josep; Wagner, Berenike C; Forchhammer, Karl; Petras, Daniel; Aiosa, Nicole; Garg, Neha; Liebeke, Manuel; Bourceau, Patric; Kang, Kyo Bin; Gadhavi, Henna; de Carvalho, Luiz Pedro Sorio; Silva Dos Santos, Mariana; Pérez-Lorente, Alicia Isabel; Molina-Santiago, Carlos; Romero, Diego; Franke, Raimo; Brönstrup, Mark; Vera Ponce de León, Arturo; Pope, Phillip Byron; La Rosa, Sabina Leanti; La Barbera, Giorgia; Roager, Henrik M; Laursen, Martin Frederik; Hammerle, Fabian; Siewert, Bianka; Peintner, Ursula; Licona-Cassani, Cuauhtemoc; Rodriguez-Orduña, Lorena; Rampler, Evelyn; Hildebrand, Felina; Koellensperger, Gunda; Schoeny, Harald; Hohenwallner, Katharina; Panzenboeck, Lisa; Gregor, Rachel; O'Neill, Ellis Charles; Roxborough, Eve Tallulah; Odoi, Jane; Bale, Nicole J; Ding, Su; Sinninghe Damsté, Jaap S; Guan, Xue Li; Cui, Jerry J; Ju, Kou-San; Silva, Denise Brentan; Silva, Fernanda Motta Ribeiro; da Silva, Gilvan Ferreira; Koolen, Hector H F; Grundmann, Carlismari; Clement, Jason A; Mohimani, Hosein; Broders, Kirk; McPhail, Kerry L; Ober-Singleton, Sidnee E; Rath, Christopher M; McDonald, Daniel; Knight, Rob; Wang, Mingxun; Dorrestein, Pieter C

Expanded bile acid annotations linked to diet and AD biomarkers

扩展的胆汁酸注释与饮食和阿尔茨海默病生物标志物相关

Akbar, Tejal; Gershkovich, Pavel; Stamatopoulos, Konstantinos; Gowland, Penny A; Stolnik, Snow; Butler, James; Marciani, Luca; Mohanty, Ipsita; Caraballo‐Rodriguez, Andres Mauricio; Zemlin, Jasmine; Labus, Jennifer S; Dorrestein, Pieter; Kaddurah‐Daouk, Rima F

Peripheral metabolism informs on future cognitive decline and development of Alzheimer’s disease in population at risk

外周代谢可预测高危人群未来认知能力下降和阿尔茨海默病的发展。

McKellar, Mehri S; Keys, Jessica R; Filiatreau, Lindsey M; McGee, Kara S; Kuruc, Joann D; Ferrari, Guido; Margolis, David M; Eron, Joseph J; Hicks, Charles B; Gay, Cynthia L; Kulminski, Alexander M; Feng, Fan; Kulminskaya, Irina; Nazarian, Alireza; Loiko, Elena; Loika, Yury; Arnold, Matthias; Mohanty, Ipsita; Caraballo‐Rodriguez, Andres Mauricio; Zemlin, Jasmine; Labus, Jennifer S; Dorrestein, Pieter; Kaddurah‐Daouk, Rima F; Karlawish, Jason; Harkins, Kristin; Pal, Subhamoy; Welsh‐Bohmer, Kathleen A; Roberts, J Scott; Gregoire, Allyson; Reader, Jonathan M; Bakulski, Kelly M; Green, Robert C; Borkowski, Kamil; Liang, Nuanyi; Arnold, Matthias; Bu, Guojun; Kaddurah‐Daouk, Rima; Zhao, Na; Kanekiyo, Takahisa; Schoemaker, Dorothee; Atkins, Alexandra; Abraham, Chelsea; Welch, Matthew; Plassman, Brenda L; Sickel, Nancy; Madsen, Corrine; Klein, Hans; DiGregorio, Danielle T; Welsh‐Bohmer, Kathleen A; Keefe, Richard SE; Slayton, Matthew A; McAllister, Margaret L; Rothrock, Jane; Belhadj, Sarrah; Gillette, Kirsten D; Hovhannisyan, Mariam; Cabeza, Roberto; Davis, Simon W; Yashin, Anatoliy I; Wu, Deqing; Arbeev, Konstantin; Duan, Hongzhe; Holmes, Rachel; Bagley, Olivia; Ukraintseva, Svetlana; Kaddurah‐Daouk, Rima; Lutz, Michael W; Man, Zhaohui; Chiba‐Falek, Ornit; Logue, Mark W; Labadorf, Adam Thomas; O'Neill, Nicholas K; Dickson, Dennis W; Flanagan, Margaret E; Franklin, Erin E; Frosch, Matt P; Gearing, Marla; Jin, Lee‐Way; Kofler, Julia; Lee, Eddie B; Mayeux, Richard; McKee, Ann C; Miller, Carol A; Murray, Melissa E; Nelson, Peter T; Perrin, Richard J; Schneider, Julie A; Stein, Thor D; Teich, Andrew F; Troncoso, Juan C; Wang, Shih‐Hsiu Jerry; Mez, Jesse; Farrer, Lindsay A; Liang, Nuanyi; Nho, Kwangsik; Newman, John W; Arnold, Matthias; Huynh, Kevin; Meikle, Peter J; Borkowski, Kamil; Kaddurah‐Daouk, Rima

Foodomics: Links to cognition and AD markers of disease

食物组学:与认知和阿尔茨海默病疾病标志物的联系

Carlozzi, Noelle E; Graves, Christopher M; Troost, Jonathan P; Ehde, Dawn M; Miner, Jennifer A; Kratz, Anna L; Labus, Jennifer S; Nho, Kwangsik; Zuffa, Simone; Batra, Richa; Meehan, Michael; West, Kiana; Zemlin, Jasmine; Caraballo‐Rodriguez, Andres Mauricio; Dorrestein, Pieter; Kaddurah‐Daouk, Rima

Microbiomes and metabolomes of dominant coral reef primary producers illustrate a potential role for immunolipids in marine symbioses

主要珊瑚礁初级生产者的微生物组和代谢组说明了免疫脂质在海洋共生中的潜在作用

Helena Mannochio-Russo #, Sean O I Swift #, Kirsten K Nakayama, Christopher B Wall, Emily C Gentry, Morgan Panitchpakdi, Andrés M Caraballo-Rodriguez, Allegra T Aron, Daniel Petras, Kathleen Dorrestein, Tatiana K Dorrestein, Taylor M Williams, Eileen M Nalley, Noam T Altman-Kurosaki, Mike Martinelli

A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data

基于分类信息的微生物代谢组学数据质谱搜索工具

Zuffa, Simone; Schmid, Robin; Bauermeister, Anelize; Gomes, Paulo Wender P; Caraballo-Rodriguez, Andres M; Abiead, Yasin El; Aron, Allegra T; Gentry, Emily C; Zemlin, Jasmine; Meehan, Michael J; Avalon, Nicole E; Cichewicz, Robert H; Buzun, Ekaterina; Terrazas, Marvic Carrillo; Hsu, Chia-Yun; Oles, Renee; Ayala, Adriana Vasquez; Zhao, Jiaqi; Chu, Hiutung; Kuijpers, Mirte C M; Jackrel, Sara L; Tugizimana, Fidele; Nephali, Lerato Pertunia; Dubery, Ian A; Madala, Ntakadzeni Edwin; Moreira, Eduarda Antunes; Costa-Lotufo, Leticia Veras; Lopes, Norberto Peporine; Rezende-Teixeira, Paula; Jimenez, Paula C; Rimal, Bipin; Patterson, Andrew D; Traxler, Matthew F; de Cassia Pessotti, Rita; Alvarado-Villalobos, Daniel; Tamayo-Castillo, Giselle; Chaverri, Priscila; Escudero-Leyva, Efrain; Quiros-Guerrero, Luis-Manuel; Bory, Alexandre Jean; Joubert, Juliette; Rutz, Adriano; Wolfender, Jean-Luc; Allard, Pierre-Marie; Sichert, Andreas; Pontrelli, Sammy; Pullman, Benjamin S; Bandeira, Nuno; Gerwick, William H; Gindro, Katia; Massana-Codina, Josep; Wagner, Berenike C; Forchhammer, Karl; Petras, Daniel; Aiosa, Nicole; Garg, Neha; Liebeke, Manuel; Bourceau, Patric; Kang, Kyo Bin; Gadhavi, Henna; de Carvalho, Luiz Pedro Sorio; Dos Santos, Mariana Silva; Pérez-Lorente, Alicia Isabel; Molina-Santiago, Carlos; Romero, Diego; Franke, Raimo; Brönstrup, Mark; de León, Arturo Vera Ponce; Pope, Phillip Byron; Rosa, Sabina Leanti La; Barbera, Giorgia La; Roager, Henrik M; Laursen, Martin Frederik; Hammerle, Fabian; Siewert, Bianka; Peintner, Ursula; Licona-Cassani, Cuauhtemoc; Rodriguez-Orduña, Lorena; Rampler, Evelyn; Hildebrand, Felina; Koellensperger, Gunda; Schoeny, Harald; Hohenwallner, Katharina; Panzenboeck, Lisa; Gregor, Rachel; O'Neill, Ellis Charles; Roxborough, Eve Tallulah; Odoi, Jane; Bale, Nicole J; Ding, Su; Sinninghe Damsté, Jaap S; Guan, Xueli Li; Cui, Jerry J; Ju, Kou-San; Silva, Denise Brentan; Silva, Fernanda Motta Ribeiro; da Silva, Gilvan Ferreira; Koolen, Hector H F; Grundmann, Carlismari; Clement, Jason A; Mohimani, Hosein; Broders, Kirk; McPhail, Kerry L; Ober-Singleton, Sidnee E; Rath, Christopher M; McDonald, Daniel; Knight, Rob; Wang, Mingxun; Dorrestein, Pieter C

ReDU: a framework to find and reanalyze public mass spectrometry data

ReDU:一个用于查找和重新分析公共质谱数据的框架

Jarmusch, Alan K; Wang, Mingxun; Aceves, Christine M; Advani, Rohit S; Aguirre, Shaden; Aksenov, Alexander A; Aleti, Gajender; Aron, Allegra T; Bauermeister, Anelize; Bolleddu, Sanjana; Bouslimani, Amina; Caraballo Rodriguez, Andres Mauricio; Chaar, Rama; Coras, Roxana; Elijah, Emmanuel O; Ernst, Madeleine; Gauglitz, Julia M; Gentry, Emily C; Husband, Makhai; Jarmusch, Scott A; Jones, Kenneth L 2nd; Kamenik, Zdenek; Le Gouellec, Audrey; Lu, Aileen; McCall, Laura-Isobel; McPhail, Kerry L; Meehan, Michael J; Melnik, Alexey V; Menezes, Riya C; Montoya Giraldo, Yessica Alejandra; Nguyen, Ngoc Hung; Nothias, Louis Felix; Nothias-Esposito, Mélissa; Panitchpakdi, Morgan; Petras, Daniel; Quinn, Robert A; Sikora, Nicole; van der Hooft, Justin J J; Vargas, Fernando; Vrbanac, Alison; Weldon, Kelly C; Knight, Rob; Bandeira, Nuno; Dorrestein, Pieter C