日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

High-quality metagenome assembly from nanopore reads with nanoMDBG

利用 nanoMDBG 从纳米孔测序数据中组装高质量宏基因组

Benoit, Gaëtan; James, Robert; Raguideau, Sébastien; Alabone, Georgina; Goodall, Tim; Chikhi, Rayan; Quince, Christopher

Analysis of metagenomic data

宏基因组数据分析

Liu, Shaopeng; Rodriguez, Judith S; Munteanu, Viorel; Ronkowski, Cynthia; Sharma, Nitesh Kumar; Alser, Mohammed; Andreace, Francesco; Blekhman, Ran; Błaszczyk, Dagmara; Chikhi, Rayan; Crandall, Keith A; Della Libera, Katja; Francis, Dallace; Frolova, Alina; Gancz, Abigail Shahar; Huntley, Naomi E; Jaiswal, Pooja; Kosciolek, Tomasz; Łabaj, Pawel P; Łabaj, Wojciech; Luan, Tu; Mason, Christopher; Moustafa, Ahmed M; Muralidharan, Harihara Subrahmaniam; Mutlu, Onur; Mansouri Ghiasi, Nika; Rahnavard, Ali; Sun, Fengzhu; Tian, Shuchang; Tierney, Braden T; Van Syoc, Emily; Vicedomini, Riccardo; Zackular, Joseph P; Zelikovsky, Alex; Zielińska, Kinga; Ganda, Erika; Davenport, Emily R; Pop, Mihai; Koslicki, David; Mangul, Serghei

BFVD-a large repository of predicted viral protein structures

BFVD——一个大型病毒蛋白结构预测库

Kim, Rachel Seongeun; Levy Karin, Eli; Mirdita, Milot; Chikhi, Rayan; Steinegger, Martin

Statistical signature of subtle behavioral changes in large-scale assays

大规模检测中细微行为变化的统计特征

Blanc, Alexandre; Laurent, François; Barbier-Chebbah, Alex; Van Assel, Hugues; Cocanougher, Benjamin T; Jones, Benjamin M W; Hague, Peter; Zlatic, Marta; Chikhi, Rayan; Vestergaard, Christian L; Jovanic, Tihana; Masson, Jean-Baptiste; Barré, Chloé

MUSET: set of utilities for constructing abundance unitig matrices from sequencing data

MUSET:用于从测序数据构建丰度单位矩阵的实用程序集

Vicedomini, Riccardo; Andreace, Francesco; Dufresne, Yoann; Chikhi, Rayan; Duitama González, Camila

Logan: Planetary-Scale Genome Assembly Surveys Life's Diversity

洛根:行星尺度基因组组装调查生命多样性

Chikhi, Rayan; Lemane, Téo; Loll-Krippleber, Raphaël; Montoliu-Nerin, Mercè; Raffestin, Brice; Camargo, Antonio Pedro; Miller, Carson J; Fiamenghi, Mateus Bernabe; Agustinho, Daniel Paiva; Majidian, Sina; Autric, Greg; Hugues, Maxime; Lee, Junkyoung; Faure, Roland; Curry, Kristen D; Moura de Sousa, Jorge A; Rocha, Eduardo P C; Koslicki, David; Medvedev, Paul; Gupta, Purav; Shen, Jessica; Morales-Tapia, Alejandro; Sihuta, Kate; Roy, Peter J; Brown, Grant W; Edgar, Robert C; Korobeynikov, Anton; Steinegger, Martin; Lareau, Caleb A; Peterlongo, Pierre; Babaian, Artem

High-quality metagenome assembly from long accurate reads with metaMDBG

利用 metaMDBG 从长而精确的读段进行高质量的宏基因组组装

Benoit, Gaëtan; Raguideau, Sébastien; James, Robert; Phillippy, Adam M; Chikhi, Rayan; Quince, Christopher

Constructing and personalizing population pangenome graphs

构建和个性化人群泛基因组图谱

Chikhi, Rayan; Dufresne, Yoann; Medvedev, Paul

Transipedia.org: k-mer-based exploration of large RNA sequencing datasets and application to cancer data

Transipedia.org:基于k-mer的大型RNA测序数据集探索及其在癌症数据中的应用

Bessière, Chloé; Xue, Haoliang; Guibert, Benoit; Boureux, Anthony; Rufflé, Florence; Viot, Julien; Chikhi, Rayan; Salson, Mikaël; Marchet, Camille; Commes, Thérèse; Gautheret, Daniel

Petabase-Scale Homology Search for Structure Prediction

用于结构预测的PB级同源性搜索

Lee, Sewon; Kim, Gyuri; Karin, Eli Levy; Mirdita, Milot; Park, Sukhwan; Chikhi, Rayan; Babaian, Artem; Kryshtafovych, Andriy; Steinegger, Martin