日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Genetic relatedness and virulence potential of Salmonella Schwarzengrund strains with or without an IncFIB-IncFIC(FII) fusion plasmid isolated from food and clinical sources

从食品和临床来源分离的沙门氏菌Schwarzengrund菌株(携带或不携带IncFIB-IncFIC(FII)融合质粒)的遗传相关性和毒力潜力

Felix, Monique A; Sopovski, Danielle; Commichaux, Seth; Yoskowitz, Noah; Aljahdali, Nesreen H; Grim, Christopher J; Abbott, Carter N; Carlton, Ashlyn; Han, Jing; Sanad, Yasser M; Zhao, Shaohua; Wang, Xiong; Foley, Steven L; Khajanchi, Bijay K

Benchmarking short and long read polishing tools for nanopore assemblies: achieving near-perfect genomes for outbreak isolates

对用于纳米孔组装的短读长和长读长测序优化工具进行基准测试:实现疫情分离株近乎完美的基因组

Luan, Tu; Commichaux, Seth; Hoffmann, Maria; Jayeola, Victor; Jang, Jae Hee; Pop, Mihai; Rand, Hugh; Luo, Yan

Database size positively correlates with the loss of species-level taxonomic resolution for the 16S rRNA and other prokaryotic marker genes

数据库大小与16S rRNA和其他原核生物标记基因的物种水平分类分辨率的丧失呈正相关。

Commichaux, Seth; Luan, Tu; Muralidharan, Harihara Subrahmaniam; Pop, Mihai

Paired metagenomic and chemical evaluation of aflatoxin-contaminated dog kibble

对受黄曲霉毒素污染的狗粮进行宏基因组学和化学联合评估

Ottesen, Andrea; Kocurek, Brandon; Reed, Elizabeth; Commichaux, Seth; Mammel, Mark; Ramachandran, Padmini; McDermott, Patrick; Flannery, Brenna M; Strain, Errol

Complete genome sequences of 17 Salmonella enterica serovar Schwarzengrund isolates carrying an IncFIB-IncFIC (FII) fusion plasmid

17株携带IncFIB-IncFIC(FII)融合质粒的沙门氏菌肠炎血清型Schwarzengrund分离株的完整基因组序列

Sopovski, Danielle; Commichaux, Seth; Zhao, Shaohua; Grim, Christopher J; Foley, Steven L; Khajanchi, Bijay K

Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation

评估质粒,以确定2020年沙门氏菌肠炎血清型纽波特洋葱疫情与疫情调查中涉及的农场之间的关联性

Commichaux, Seth; Rand, Hugh; Javkar, Kiran; Molloy, Erin K; Pettengill, James B; Pightling, Arthur; Hoffmann, Maria; Pop, Mihai; Jayeola, Victor; Foley, Steven; Luo, Yan

Evaluating the accuracy of Listeria monocytogenes assemblies from quasimetagenomic samples using long and short reads

利用长读长和短读长评估单增李斯特菌准宏基因组样本组装的准确性

Commichaux, Seth; Javkar, Kiran; Ramachandran, Padmini; Nagarajan, Niranjan; Bertrand, Denis; Chen, Yi; Reed, Elizabeth; Gonzalez-Escalona, Narjol; Strain, Errol; Rand, Hugh; Pop, Mihai; Ottesen, Andrea

Current State of and Future Opportunities for Prediction in Microbiome Research: Report from the Mid-Atlantic Microbiome Meet-up in Baltimore on 9 January 2019

微生物组研究预测的现状及未来机遇:2019年1月9日巴尔的摩中大西洋微生物组研讨会报告

Sakowski, Eric; Uritskiy, Gherman; Cooper, Rachel; Gomes, Maya; McLaren, Michael R; Meisel, Jacquelyn S; Mickol, Rebecca L; Mintz, C David; Mongodin, Emmanuel F; Pop, Mihai; Rahman, Mohammad Arifur; Sanchez, Alvaro; Timp, Winston; Vela, Jeseth Delgado; Wolz, Carly Muletz; Zackular, Joseph P; Chopyk, Jessica; Commichaux, Seth; Davis, Meghan; Dluzen, Douglas; Ganesan, Sukirth M; Haruna, Muyideen; Nasko, Dan; Regan, Mary J; Sarria, Saul; Shah, Nidhi; Stacy, Brook; Taylor, Dylan; DiRuggiero, Jocelyne; Preheim, Sarah P

Characterization of the Microbiota of Oyster Larvae (Crassostrea virginica) and Tank Water from an Aquaculture System with High and Low Larval Survival Rates

对高低幼体存活率水产养殖系统中牡蛎幼体(Crassostrea virginica)及其养殖池水中微生物群落进行表征

Ramachandran, Padmini; Reed, Elizabeth; Commichaux, Seth; Strain, Errol; Depaola, Angelo; Rikard, Scott; Ottesen, Andrea