日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

A Multi-Omics Processing Pipeline (MOPP) for Extracting Taxonomic and Functional Insights from Metaribosome Profiling (metaRibo-Seq) data

用于从宏核糖体谱(metaRibo-Seq)数据中提取分类学和功能信息的多组学处理流程(MOPP)

Weng, Yuhan; Moyne, Oriane; Walker, Corinn; Haddad, Eli; Lieng, Chloe; Chin, Loryn; Rahman, Gibraan; McDonald, Daniel; Knight, Rob; Zengler, Karsten

Synthesis-driven reverse metabolomics reveals 3-hydroxy N-acyl amides as gut microbial molecules

合成驱动的逆向代谢组学揭示了3-羟基N-酰基酰胺是肠道微生物分子

Deleray, Victoria; Charron-Lamoureux, Vincent; Vittali, Kyle; Mannochio-Russo, Helena; Wang, Crystal X; Walker, Corinn; Zengler, Karsten; Siegel, Dionicio; Dorrestein, Pieter C

The microbiome diversifies long- to short-chain fatty acid-derived N-acyl lipids

微生物群落使长链脂肪酸衍生的N-酰基脂质多样化为短链脂肪酸衍生的N-酰基脂质。

Helena Mannochio-Russo ,Vincent Charron-Lamoureux ,Martijn van Faassen ,Santosh Lamichhane ,Wilhan D Gonçalves Nunes ,Victoria Deleray ,Adriana V Ayala ,Yuichiro Tanaka ,Abubaker Patan ,Kyle Vittali ,Prajit Rajkumar ,Yasin El Abiead ,Haoqi Nina Zhao ,Paulo Wender Portal Gomes ,Ipsita Mohanty ,Carlynda Lee ,Aidan Sund ,Meera Sharma ,Yuanhao Liu ,David Pattynama ,Gregory T Walker ,Grant J Norton ,Lora Khatib ,Mohammadsobhan S Andalibi ,Crystal X Wang ,Ronald J Ellis ,David J Moore ,Jennifer E Iudicello ,Donald Franklin Jr ,Scott Letendre ,Loryn Chin ,Corinn Walker ,Simone Renwick ,Jasmine Zemlin ,Michael J Meehan ,Xinyang Song ,Dennis Kasper ,Zachary Burcham ,Jane J Kim ,Sejal Kadakia ,Manuela Raffatellu ,Lars Bode ,Hiutung Chu ,Karsten Zengler ,Mingxun Wang ,Dionicio Siegel ,Rob Knight ,Pieter C Dorrestein

Data navigation on the ENCODE portal

ENCODE门户网站上的数据导航

Kagda, Meenakshi S; Lam, Bonita; Litton, Casey; Small, Corinn; Sloan, Cricket A; Spragins, Emma; Tanaka, Forrest; Whaling, Ian; Gabdank, Idan; Youngworth, Ingrid; Strattan, J Seth; Hilton, Jason; Jou, Jennifer; Au, Jessica; Lee, Jin-Wook; Andreeva, Kalina; Graham, Keenan; Lin, Khine; Simison, Matt; Jolanki, Otto; Sud, Paul; Assis, Pedro; Adenekan, Philip; Miyasato, Stuart; Zhong, Weiwei; Luo, Yunhai; Myers, Zachary; Cherry, J Michael; Hitz, Benjamin C

Microbiome-derived bile acid signatures in early life and their association with islet autoimmunity.

生命早期微生物组来源的胆汁酸特征及其与胰岛自身免疫的关系。

Lamichhane Santosh, Dickens Alex M, Buchacher Tanja, Lou Tianai, Charron-Lamoureux Vincent, Kattelus Roosa, Karmacharya Pragya, da Silva Lucas Pinto, Kråkström Matilda, Rasool Omid, Sen Partho, Walker Corinn, Patan Abubaker, Gentry Emily C, Zuffa Simone, Arzoomand Aron, Lakshmikanth Tadepally, Mikeš Jaromir, Mebrahtu Aman, Vatanen Tommi, Raffatellu Manuela, Zengler Karsten, Hyötyläinen Tuulia, Xavier Ramnik J, Brodin Petter, Lahesmaa Riitta, Dorrestein Pieter C, Knip Mikael, Orešič Matej

CZ CELLxGENE Discover: a single-cell data platform for scalable exploration, analysis and modeling of aggregated data

CZ CELLxGENE Discover:一个用于对聚合数据进行可扩展探索、分析和建模的单细胞数据平台

Abdulla, Shibla; Aevermann, Brian; Assis, Pedro; Badajoz, Seve; Bell, Sidney M; Bezzi, Emanuele; Cakir, Batuhan; Chaffer, Jim; Chambers, Signe; Cherry, J Michael; Chi, Tiffany; Chien, Jennifer; Dorman, Leah; Garcia-Nieto, Pablo; Gloria, Nayib; Hastie, Mim; Hegeman, Daniel; Hilton, Jason; Huang, Timmy; Infeld, Amanda; Istrate, Ana-Maria; Jelic, Ivana; Katsuya, Kuni; Kim, Yang Joon; Liang, Karen; Lin, Mike; Lombardo, Maximilian; Marshall, Bailey; Martin, Bruce; McDade, Fran; Megill, Colin; Patel, Nikhil; Predeus, Alexander; Raymor, Brian; Robatmili, Behnam; Rogers, Dave; Rutherford, Erica; Sadgat, Dana; Shin, Andrew; Small, Corinn; Smith, Trent; Sridharan, Prathap; Tarashansky, Alexander; Tavares, Norbert; Thomas, Harley; Tolopko, Andrew; Urisko, Meghan; Yan, Joyce; Yeretssian, Garabet; Zamanian, Jennifer; Mani, Arathi; Cool, Jonah; Carr, Ambrose

A resource to empirically establish drug exposure records directly from untargeted metabolomics data

一种直接从非靶向代谢组学数据中实证建立药物暴露记录的资源

Zhao, Haoqi Nina; Kvitne, Kine Eide; Brungs, Corinna; Mohan, Siddharth; Charron-Lamoureux, Vincent; Bittremieux, Wout; Tang, Runbang; Schmid, Robin; Lamichhane, Santosh; Xing, Shipei; El Abiead, Yasin; Andalibi, Mohammadsobhan S; Mannochio-Russo, Helena; Ambre, Madison; Avalon, Nicole E; Bryant, MacKenzie; Burnett, Lindsey A; Caraballo-Rodríguez, Andrés Mauricio; Maya, Martin Casas; Chin, Loryn; Corominas, Lluís; Ellis, Ronald J; Franklin, Donald; Girod, Sagan; Gomes, Paulo Wender P; Hansen, Lauren; Heaton, Robert K; Iudicello, Jennifer E; Jarmusch, Alan K; Khatib, Lora; Letendre, Scott; Magyari, Sarolt; McDonald, Daniel; Mohanty, Ipsita; Cumsille, Andrés; Moore, David J; Rajkumar, Prajit; Ross, Dylan H; Sapre, Harshada; Shahneh, Mohammad Reza Zare; Gil-Solsona, Ruben; Thomas, Sydney P; Tribelhorn, Caitlin; Tubb, Helena M; Walker, Corinn; Wang, Crystal X; Zemlin, Jasmine; Zuffa, Simone; Wishart, David S; Gago-Ferrero, Pablo; Kaddurah-Daouk, Rima; Wang, Mingxun; Raffatellu, Manuela; Zengler, Karsten; Pluskal, Tomáš; Xu, Libin; Knight, Rob; Tsunoda, Shirley M; Dorrestein, Pieter C

Trajectories of microbiome-derived bile acids in early life - insights into the progression to islet autoimmunity.

生命早期微生物组衍生胆汁酸的轨迹——对胰岛自身免疫进展的见解

Lamichhane Santosh, Dickens Alex M, Buchacher Tanja, Lou Evita Tianai, Charron-Lamoureux Vincent, Kattelus Roosa, Karmacharya Pragya, Pinto da Silva Lucas, Kråkström Matilda, Rasool Omid, Sen Partho, Walker Corinn, Patan Abubaker, Gentry Emily C, Arzoomand Aron, Lakshmikanth Tadepally, Mikeš Jaromir, Mebrahtu Aman, Vatanen Tommi, Raffatellu Manuela, Zengler Karsten, Hyötyläinen Tuulia, Xavier Ramnik J, Brodin Petter, Lahesmaa Riitta, Dorrestein Pieter C, Knip Mikael, Orešič Matej

Unraveling the complexities of fibrosis and ductular reaction in liver disease: pathogenesis, mechanisms, and therapeutic insights

揭示肝病中纤维化和胆管反应的复杂性:发病机制、作用机制和治疗见解

Marakovits, Corinn; Francis, Heather

Empirically establishing drug exposure records directly from untargeted metabolomics data

通过非靶向代谢组学数据直接建立药物暴露记录的经验数据

Zhao, Haoqi Nina; Kvitne, Kine Eide; Brungs, Corinna; Mohan, Siddharth; Charron-Lamoureux, Vincent; Bittremieux, Wout; Tang, Runbang; Schmid, Robin; Lamichhane, Santosh; El Abiead, Yasin; Andalibi, Mohammadsobhan S; Mannochio-Russo, Helena; Ambre, Madison; Avalon, Nicole E; Bryant, MacKenzie; Caraballo-Rodríguez, Andrés Mauricio; Maya, Martin Casas; Chin, Loryn; Ellis, Ronald J; Franklin, Donald; Girod, Sagan; Gomes, Paulo Wender P; Hansen, Lauren; Heaton, Robert; Iudicello, Jennifer E; Jarmusch, Alan K; Khatib, Lora; Letendre, Scott; Magyari, Sarolt; McDonald, Daniel; Mohanty, Ipsita; Cumsille, Andrés; Moore, David J; Rajkumar, Prajit; Ross, Dylan H; Sapre, Harshada; Shahneh, Mohammad Reza Zare; Thomas, Sydney P; Tribelhorn, Caitlin; Tubb, Helena M; Walker, Corinn; Wang, Crystal X; Xing, Shipei; Zemlin, Jasmine; Zuffa, Simone; Wishart, David S; Kaddurah-Daouk, Rima; Wang, Mingxun; Raffatellu, Manuela; Zengler, Karsten; Pluskal, Tomáš; Xu, Libin; Knight, Rob; Tsunoda, Shirley M; Dorrestein, Pieter C