日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing

Severus 利用长读长测序技术检测癌症基因组中的体细胞结构变异和复杂重排。

Keskus, Ayse G; Bryant, Asher; Ahmad, Tanveer; Yoo, Byunggil; Aganezov, Sergey; Goretsky, Anton; Donmez, Ataberk; Lansdon, Lisa A; Rodriguez, Isabel; Park, Jimin; Liu, Yuelin; Cui, Xiwen; Gardner, Joshua; McNulty, Brandy; Sacco, Samuel; Shetty, Jyoti; Zhao, Yongmei; Tran, Bao; Narzisi, Giuseppe; Helland, Adrienne; Cook, Daniel E; Chang, Pi-Chuan; Kolesnikov, Alexey; Carroll, Andrew; Molloy, Erin K; Bi, Chengpeng; Walter, Adam; Gibson, Margaret; Pushel, Irina; Guest, Erin; Pastinen, Tomi; Shafin, Kishwar; Miga, Karen H; Malikic, Salem; Day, Chi-Ping; Robine, Nicolas; Sahinalp, Cenk; Dean, Michael; Farooqi, Midhat S; Paten, Benedict; Kolmogorov, Mikhail

GeneAgent: self-verification language agent for gene-set analysis using domain databases

GeneAgent:一种利用领域数据库进行基因集分析的自验证语言代理

Wang, Zhizheng; Jin, Qiao; Wei, Chih-Hsuan; Tian, Shubo; Lai, Po-Ting; Zhu, Qingqing; Day, Chi-Ping; Ross, Christina; Leaman, Robert; Lu, Zhiyong

Non-V600E BRAF mutations and treatment for hairy cell leukemia

非V600E BRAF突变及毛细胞白血病的治疗

Arons, Evgeny; Tai, Chin-Hsien; Suraj, Joshi; Liu, Yuelin; Day, Chi-Ping; Raffeld, Mark; Xi, Liqiang; Zhou, Hong; Gould, Mory; Shpilman, Isaac; Oakes, Cristopher C; Bhat, Seema; Grever, Michael; Jones, Daniel; Rogers, Kerry; Wang, Hao-Wei; Yuan, Constance M; Sahinalp, Cenk; Kreitman, Robert J

Longitudinal liquid biopsy identifies an early predictive biomarker of immune checkpoint blockade response in head and neck squamous cell carcinoma

纵向液体活检可识别头颈部鳞状细胞癌免疫检查点阻断反应的早期预测性生物标志物

Wang, Binbin; Saddawi-Konefka, Robert; Clubb, Lauren M; Tang, Shiqi; Wu, Di; Mukherjee, Sumit; Sahni, Sahil; Dhruba, Saugato Rahman; Yang, Xinping; Patiyal, Sumeet; Day, Chi-Ping; Desai, Parth A; Allen, Clint; Wang, Kun; Gutkind, J Silvio; Ruppin, Eytan

Metabolic dependency mapping identifies Peroxiredoxin 1 as a driver of resistance to ATM inhibition

代谢依赖性图谱分析表明,过氧化物酶1是ATM抑制剂耐药性的驱动因素。

Li, Haojian; Furusawa, Takashi; Cavero, Renzo; Xiao, Yunjie; Chari, Raj; Wu, Xiaolin; Sun, David; Hartmann, Oliver; Dhall, Anjali; Holewinski, Ronald; Andresson, Thorkell; Karim, Baktiar; Villamor-Payà, Marina; Gallardo, Devorah; Day, Chi-Ping; Pal, Lipika R; Nair, Nishanth Ulhas; Ruppin, Eytan; Aladjem, Mirit I; Pommier, Yves; Diefenbacher, Markus E; Lim, Jung Mi; Levine, Rodney L; Stracker, Travis H; Weyemi, Urbain

Long-read sequencing of single cell-derived melanoma subclones reveals divergent and parallel genomic and epigenomic evolutionary trajectories

对单细胞来源的黑色素瘤亚克隆进行长读长测序,揭示了基因组和表观基因组进化轨迹的趋异性和平行性。

Liu, Yuelin; Goretsky, Anton; Keskus, Ayse G; Malikic, Salem; Ahmad, Tanveer; Gertz, E Michael; Mehrabadi, Farid Rashidi; Kelly, Michael; Hernandez, Maria; Seibert, Charlie; Caravaca, Juan Manuel; Kline, Kayla; Zhao, Yongmei; Wu, Ying; Shrestha, Biraj; Tran, Bao; Ghosh, Arindam; Cui, Xiwen; Sassano, Antonella; Malik, Laksh; Baker, Breeana; Blauwendraat, Cornelis; Billingsley, Kimberley J; Perez-Guijarro, Eva; Merlino, Glenn; Molloy, Erin K; Sahinalp, S Cenk; Day, Chi-Ping; Kolmogorov, Mikhail

Clinico-genomic features predict distinct metastatic phenotypes in cutaneous melanoma

临床基因组特征可预测皮肤黑色素瘤的不同转移表型

Aprati, Tyler J; Day, Chi-Ping; Lee, Daniel; Pan, Alexander; Jee, Justin; Tarantino, Giuseppe; Manos, Michael P; Faulkner, Hannah; Holovatska, Marta M; Khaddour, Karam; Feng, Catherine H; Burke, Kelly P; Glettig, Marc; Ohler, Zoe Weaver; El Meskini, Rajaa; Hodi, F Stephen; Haq, Rizwan; Shoushtari, Alexander N; Schultz, Nikolaus; Ishizuka, Jeffrey J; Gusev, Alexander; Griffith, Maryclare; Kehl, Kenneth L; Liu, David

Pan-cancer prediction of tumor immune activation and response to immune checkpoint blockade from tumor transcriptomics and histopathology

基于肿瘤转录组学和组织病理学的泛癌肿瘤免疫激活和对免疫检查点阻断反应的预测

Mukherjee, Sumit; Patiyal, Sumeet; Pal, Lipika R; Chang, Tian-Gen; Biswas, Sumona; Dhruba, Saugato Rahman; Stemmer, Amos; Singh, Arashdeep; Yousefi-Rad, Abbas; Chen, Tien-Hua; Wang, Binbin; Marino, Denis; Shon, Wonwoo; Yuan, Yuan; Faries, Mark; Hamid, Omid; Reckamp, Karen; Waissengrin, Barliz; Ornelas, Beatriz; Chu, Pen-Yuan; Boudjadi, Salah; Ley, Lisa; Akbulut, Dilara; Ahmar, Nourhan El; Signoretti, Sabina; Braun, David A; Joo, Hyunjeong; Kim, Hyungsoo; Osipov, Arsen; Figlin, Robert A; Bar, Jair; Barshack, Iris; Day, Chi-Ping; Sargsyan, Karine; Apolo, Andrea B; Aldape, Kenneth; Yang, Muh-Hwa; Atkins, Michael B; Ronai, Ze'ev A; Hoang, Danh-Tai; Ruppin, Eytan

Stochastic modeling of single-cell gene expression adaptation reveals non-genomic contribution to evolution of tumor subclones

单细胞基因表达适应的随机建模揭示了非基因组因素对肿瘤亚克隆进化的贡献

Hirsch, M G; Pal, Soumitra; Rashidi Mehrabadi, Farid; Malikic, Salem; Gruen, Charli; Sassano, Antonella; Pérez-Guijarro, Eva; Merlino, Glenn; Sahinalp, S Cenk; Molloy, Erin K; Day, Chi-Ping; Przytycka, Teresa M

Single-cell-guided identification of logic-gated antigen combinations for designing effective and safe CAR therapy

利用单细胞引导技术鉴定逻辑门控抗原组合,以设计有效且安全的CAR疗法

Madan, Sanna; Chang, Tian-Gen; Harris, Alexandra R; Liu, Huaitian; Martinez, Andrew; Dhruba, Saugato Rahman; Wang, Binbin; Rajagopal, Padma Sheila; Sinha, Sanju; Srinivasan, Aravind; Knott, Simon R V; Sayed, Shahin; Makokha, Francis; Day, Chi-Ping; Gierach, Gretchen L; Ambs, Stefan; Schäffer, Alejandro A; Ruppin, Eytan