日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

A Reference-Free Algorithm Discovers Regulation in the Plant Transcriptome

一种无需参考序列的算法发现了植物转录组中的调控机制

Meyer, Elisabeth; Saldivar, Evan V; Kokot, Marek; Xue, Bo; Deorowicz, Sebastian; Rhee, Seung Y; Salzman, Julia

MDCompress: better, faster compression of molecular dynamics simulation trajectories

MDCompress:更好、更快的分子动力学模拟轨迹压缩

Kokot, Marek; Roy, Amitava; Wheeler, Travis J; Deorowicz, Sebastian

FunctionaL Assigning Sequence Homing (FLASH) maps phenotype to sequence with deep and machine learning

功能性序列归巢(FLASH)利用深度学习和机器学习将表型映射到序列。

Cotter, Daniel J; Harrison, Marie-Claire; Rustagi, Arjun; Wang, Peter L; Kokot, Marek; Carey, Allison F; Deorowicz, Sebastian; Salzman, Julia

Ultrafast and accurate sequence alignment and clustering of viral genomes

病毒基因组的超快速、高精度序列比对和聚类

Zielezinski, Andrzej; Gudyś, Adam; Barylski, Jakub; Siminski, Krzysztof; Rozwalak, Piotr; Dutilh, Bas E; Deorowicz, Sebastian

An nf-core framework for the systematic comparison of alternative modeling tools: the multiple sequence alignment case study

用于系统比较不同建模工具的 nf-core 框架:多序列比对案例研究

Santus, Luisa; Espinosa-Carrasco, Jose; Rauschning, Leon; Mir-Pedrol, Júlia; Trujnara, Igor; Vignoli, Alessio; Mansouri, Leila; Baltzis, Athanasios; Floden, Evan W; Di Tommaso, Paolo; Garriga, Edgar; Gudyś, Adam; Deorowicz, Sebastian; Gilchrist, Cameron; Steinegger, Martin; Notredame, Cedric

sc-SPLASH provides ultra-efficient reference-free discovery in barcoded single-cell sequencing

sc-SPLASH 在条形码单细胞测序中提供超高效的无参考发现

Roozbeh Dehghannasiri, Marek Kokot, Alexander L Starr, Jamie Maziarz, Tal Gordon, Serena Y Tan, Peter L Wang, Ayelet Voskoboynik, Jacob M Musser, Sebastian Deorowicz, Julia Salzman1

A reference-free algorithm discovers regulation in the plant transcriptome

一种无需参考序列的算法发现了植物转录组中的调控机制

Meyer, Elisabeth; Saldivar, Evan V; Kokot, Marek; Xue, Bo; Deorowicz, Sebastian; Rhee, Seung Y; Salzman, Julia

Efficient protein structure archiving using ProteStAr

利用 ProteStAr 进行高效的蛋白质结构存档

Deorowicz, Sebastian; Gudyś, Adam

Scalable, ultra-fast, and low-memory construction of compacted de Bruijn graphs with Cuttlefish 2

使用 Cuttlefish 2 构建可扩展、超快速且低内存的压缩 de Bruijn 图

Khan, Jamshed; Kokot, Marek; Deorowicz, Sebastian; Patro, Rob

PHIST: fast and accurate prediction of prokaryotic hosts from metagenomic viral sequences

PHIST:基于宏基因组病毒序列快速准确地预测原核宿主

Zielezinski, Andrzej; Deorowicz, Sebastian; Gudyś, Adam