日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

The UCSC Genome Browser database: 2026 update

UCSC基因组浏览器数据库:2026年更新

Casper, Jonathan; Speir, Matthew L; Raney, Brian J; Perez, Gerardo; Nassar, Luis R; Lee, Christopher M; Hinrichs, Angie S; Gonzalez, Jairo Navarro; Fischer, Clay; Diekhans, Mark; Clawson, Hiram; Benet-Pages, Anna; Barber, Galt P; Vaske, Charles J; van Baren, Marijke J; Wang, Karen; Rodriguez, Yesenia Joanna Puga; Jenkins-Kiefer, Jaidan Ashlyn; Chalamala, Megna; Haussler, David; Kent, William James; Haeussler, Maximilian

The diploid reference genome of a human embryonic stem cell line

人类胚胎干细胞系的二倍体参考基因组

Pačar, Ivana; Ungaro, Matteo Tommaso; Chen, Ying; Dallali, Hamza; Medico, Jack A; Hebbar, Prajna; Diekhans, Mark; Di Tommaso, Elena; Geleta, Margarita; Chan, Patricia P; Lowe, Todd M; Balacco, Jennifer; Jain, Nivesh; Ackerman, Francine; Mochi, Michela; Ioannidis, Alexander G; Sawarkar, Niranjan; Diaz, Kasandra; Krishna Sudhakar, Kavitha; Powell, Joseph E; Jain, Miten; Rosa, Alessandro; Croft, Gist F; Tanzer, Andrea; Jarvis, Erich D; Formenti, Giulio; Salama, Sofie R; Giunta, Simona

Evaluating genome assemblies with HMM-Flagger

使用 HMM-Flagger 评估基因组组装

Asri, Mobin; Eizenga, Jordan M; Hebbar, Prajna; Real, Taylor D; Lucas, Julian; Loucks, Hailey; Calicchio, Alessandro; Diekhans, Mark; Eichler, Evan E; Salama, Sofie; Miga, Karen H; Paten, Benedict

Complete sequencing of ape genomes

猿类基因组的完全测序

Yoo, DongAhn; Rhie, Arang; Hebbar, Prajna; Antonacci, Francesca; Logsdon, Glennis A; Solar, Steven J; Antipov, Dmitry; Pickett, Brandon D; Safonova, Yana; Montinaro, Francesco; Luo, Yanting; Malukiewicz, Joanna; Storer, Jessica M; Lin, Jiadong; Sequeira, Abigail N; Mangan, Riley J; Hickey, Glenn; Monfort Anez, Graciela; Balachandran, Parithi; Bankevich, Anton; Beck, Christine R; Biddanda, Arjun; Borchers, Matthew; Bouffard, Gerard G; Brannan, Emry; Brooks, Shelise Y; Carbone, Lucia; Carrel, Laura; Chan, Agnes P; Crawford, Juyun; Diekhans, Mark; Engelbrecht, Eric; Feschotte, Cedric; Formenti, Giulio; Garcia, Gage H; de Gennaro, Luciana; Gilbert, David; Green, Richard E; Guarracino, Andrea; Gupta, Ishaan; Haddad, Diana; Han, Junmin; Harris, Robert S; Hartley, Gabrielle A; Harvey, William T; Hiller, Michael; Hoekzema, Kendra; Houck, Marlys L; Jeong, Hyeonsoo; Kamali, Kaivan; Kellis, Manolis; Kille, Bryce; Lee, Chul; Lee, Youngho; Lees, William; Lewis, Alexandra P; Li, Qiuhui; Loftus, Mark; Loh, Yong Hwee Eddie; Loucks, Hailey; Ma, Jian; Mao, Yafei; Martinez, Juan F I; Masterson, Patrick; McCoy, Rajiv C; McGrath, Barbara; McKinney, Sean; Meyer, Britta S; Miga, Karen H; Mohanty, Saswat K; Munson, Katherine M; Pal, Karol; Pennell, Matt; Pevzner, Pavel A; Porubsky, David; Potapova, Tamara; Ringeling, Francisca R; Rocha, Joana L; Ryder, Oliver A; Sacco, Samuel; Saha, Swati; Sasaki, Takayo; Schatz, Michael C; Schork, Nicholas J; Shanks, Cole; Smeds, Linnéa; Son, Dongmin R; Steiner, Cynthia; Sweeten, Alexander P; Tassia, Michael G; Thibaud-Nissen, Françoise; Torres-González, Edmundo; Trivedi, Mihir; Wei, Wenjie; Wertz, Julie; Yang, Muyu; Zhang, Panpan; Zhang, Shilong; Zhang, Yang; Zhang, Zhenmiao; Zhao, Sarah A; Zhu, Yixin; Jarvis, Erich D; Gerton, Jennifer L; Rivas-González, Iker; Paten, Benedict; Szpiech, Zachary A; Huber, Christian D; Lenz, Tobias L; Konkel, Miriam K; Yi, Soojin V; Canzar, Stefan; Watson, Corey T; Sudmant, Peter H; Molloy, Erin; Garrison, Erik; Lowe, Craig B; Ventura, Mario; O'Neill, Rachel J; Koren, Sergey; Makova, Kateryna D; Phillippy, Adam M; Eichler, Evan E

The UCSC Genome Browser database: 2025 update

UCSC基因组浏览器数据库:2025年更新

Perez, Gerardo; Barber, Galt P; Benet-Pages, Anna; Casper, Jonathan; Clawson, Hiram; Diekhans, Mark; Fischer, Clay; Gonzalez, Jairo Navarro; Hinrichs, Angie S; Lee, Christopher M; Nassar, Luis R; Raney, Brian J; Speir, Matthew L; van Baren, Marijke J; Vaske, Charles J; Haussler, David; Kent, W James; Haeussler, Maximilian

GENCODE 2025: reference gene annotation for human and mouse

GENCODE 2025:人类和小鼠的参考基因注释

Mudge, Jonathan M; Carbonell-Sala, Sílvia; Diekhans, Mark; Martinez, Jose Gonzalez; Hunt, Toby; Jungreis, Irwin; Loveland, Jane E; Arnan, Carme; Barnes, If; Bennett, Ruth; Berry, Andrew; Bignell, Alexandra; Cerdán-Vélez, Daniel; Cochran, Kelly; Cortés, Lucas T; Davidson, Claire; Donaldson, Sarah; Dursun, Cagatay; Fatima, Reham; Hardy, Matthew; Hebbar, Prajna; Hollis, Zoe; James, Benjamin T; Jiang, Yunzhe; Johnson, Rory; Kaur, Gazaldeep; Kay, Mike; Mangan, Riley J; Maquedano, Miguel; Gómez, Laura Martínez; Mathlouthi, Nourhen; Merritt, Ryan; Ni, Pengyu; Palumbo, Emilio; Perteghella, Tamara; Pozo, Fernando; Raj, Shriya; Sisu, Cristina; Steed, Emily; Sumathipala, Dulika; Suner, Marie-Marthe; Uszczynska-Ratajczak, Barbara; Wass, Elizabeth; Yang, Yucheng T; Zhang, Dingyao; Finn, Robert D; Gerstein, Mark; Guigó, Roderic; Hubbard, Tim J P; Kellis, Manolis; Kundaje, Anshul; Paten, Benedict; Tress, Michael L; Birney, Ewan; Martin, Fergal J; Frankish, Adam

Making genomic data FAIR through effective Data Portals

通过有效的数据门户使基因组数据符合 FAIR 原则

Speir, Matthew L; Teh, Wei Kheng; Perry, Marc D; Schwartz, Rachel; Nejad, Parisa; Harris, Tim; Fischer, Clay; Diekhans, Mark; Lee, Brian T; Paten, Benedict; Kent, W James; Haeussler, Maximilian

Genetic diversity and regulatory features of human-specific NOTCH2NL duplications

人类特异性 NOTCH2NL 重复的遗传多样性和调控特征

Real, Taylor D; Hebbar, Prajna; Yoo, DongAhn; Antonacci, Francesca; Pačar, Ivana; Diekhans, Mark; Mikol, Gregory J; Popoola, Oyeronke G; Mallory, Benjamin J; Vollger, Mitchell R; Dishuck, Philip C; Guitart, Xavi; Rozanski, Allison N; Munson, Katherine M; Hoekzema, Kendra; Ranchalis, Jane E; Neph, Shane J; Sedeño-Cortes, Adriana E; Paten, Benedict; Salama, Sofie R; Stergachis, Andrew B; Eichler, Evan E

The complete sequence and comparative analysis of ape sex chromosomes

猿类性染色体的完整序列及比较分析

Makova, Kateryna D; Pickett, Brandon D; Harris, Robert S; Hartley, Gabrielle A; Cechova, Monika; Pal, Karol; Nurk, Sergey; Yoo, DongAhn; Li, Qiuhui; Hebbar, Prajna; McGrath, Barbara C; Antonacci, Francesca; Aubel, Margaux; Biddanda, Arjun; Borchers, Matthew; Bornberg-Bauer, Erich; Bouffard, Gerard G; Brooks, Shelise Y; Carbone, Lucia; Carrel, Laura; Carroll, Andrew; Chang, Pi-Chuan; Chin, Chen-Shan; Cook, Daniel E; Craig, Sarah J C; de Gennaro, Luciana; Diekhans, Mark; Dutra, Amalia; Garcia, Gage H; Grady, Patrick G S; Green, Richard E; Haddad, Diana; Hallast, Pille; Harvey, William T; Hickey, Glenn; Hillis, David A; Hoyt, Savannah J; Jeong, Hyeonsoo; Kamali, Kaivan; Pond, Sergei L Kosakovsky; LaPolice, Troy M; Lee, Charles; Lewis, Alexandra P; Loh, Yong-Hwee E; Masterson, Patrick; McGarvey, Kelly M; McCoy, Rajiv C; Medvedev, Paul; Miga, Karen H; Munson, Katherine M; Pak, Evgenia; Paten, Benedict; Pinto, Brendan J; Potapova, Tamara; Rhie, Arang; Rocha, Joana L; Ryabov, Fedor; Ryder, Oliver A; Sacco, Samuel; Shafin, Kishwar; Shepelev, Valery A; Slon, Viviane; Solar, Steven J; Storer, Jessica M; Sudmant, Peter H; Sweetalana; Sweeten, Alex; Tassia, Michael G; Thibaud-Nissen, Françoise; Ventura, Mario; Wilson, Melissa A; Young, Alice C; Zeng, Huiqing; Zhang, Xinru; Szpiech, Zachary A; Huber, Christian D; Gerton, Jennifer L; Yi, Soojin V; Schatz, Michael C; Alexandrov, Ivan A; Koren, Sergey; O'Neill, Rachel J; Eichler, Evan E; Phillippy, Adam M

Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements

哺乳动物蛋白质和调控元件中与发声学习相关的趋同进化

Wirthlin, Morgan E; Schmid, Tobias A; Elie, Julie E; Zhang, Xiaomeng; Kowalczyk, Amanda; Redlich, Ruby; Shvareva, Varvara A; Rakuljic, Ashley; Ji, Maria B; Bhat, Ninad S; Kaplow, Irene M; Schäffer, Daniel E; Lawler, Alyssa J; Wang, Andrew Z; Phan, BaDoi N; Annaldasula, Siddharth; Brown, Ashley R; Lu, Tianyu; Lim, Byung Kook; Azim, Eiman; Clark, Nathan L; Meyer, Wynn K; Pond, Sergei L Kosakovsky; Chikina, Maria; Yartsev, Michael M; Pfenning, Andreas R; Andrews, Gregory; Armstrong, Joel C; Bianchi, Matteo; Birren, Bruce W; Bredemeyer, Kevin R; Breit, Ana M; Christmas, Matthew J; Clawson, Hiram; Damas, Joana; Di Palma, Federica; Diekhans, Mark; Dong, Michael X; Eizirik, Eduardo; Fan, Kaili; Fanter, Cornelia; Foley, Nicole M; Forsberg-Nilsson, Karin; Garcia, Carlos J; Gatesy, John; Gazal, Steven; Genereux, Diane P; Goodman, Linda; Grimshaw, Jenna; Halsey, Michaela K; Harris, Andrew J; Hickey, Glenn; Hiller, Michael; Hindle, Allyson G; Hubley, Robert M; Hughes, Graham M; Johnson, Jeremy; Juan, David; Kaplow, Irene M; Karlsson, Elinor K; Keough, Kathleen C; Kirilenko, Bogdan; Koepfli, Klaus-Peter; Korstian, Jennifer M; Kowalczyk, Amanda; Kozyrev, Sergey V; Lawler, Alyssa J; Lawless, Colleen; Lehmann, Thomas; Levesque, Danielle L; Lewin, Harris A; Li, Xue; Lind, Abigail; Lindblad-Toh, Kerstin; Mackay-Smith, Ava; Marinescu, Voichita D; Marques-Bonet, Tomas; Mason, Victor C; Meadows, Jennifer R S; Meyer, Wynn K; Moore, Jill E; Moreira, Lucas R; Moreno-Santillan, Diana D; Morrill, Kathleen M; Muntané, Gerard; Murphy, William J; Navarro, Arcadi; Nweeia, Martin; Ortmann, Sylvia; Osmanski, Austin; Paten, Benedict; Paulat, Nicole S; Pfenning, Andreas R; Phan, BaDoi N; Pollard, Katherine S; Pratt, Henry E; Ray, David A; Reilly, Steven K; Rosen, Jeb R; Ruf, Irina; Ryan, Louise; Ryder, Oliver A; Sabeti, Pardis C; Schäffer, Daniel E; Serres, Aitor; Shapiro, Beth; Smit, Arian F A; Springer, Mark; Srinivasan, Chaitanya; Steiner, Cynthia; Storer, Jessica M; Sullivan, Kevin A M; Sullivan, Patrick F; Sundström, Elisabeth; Supple, Megan A; Swofford, Ross; Talbot, Joy-El; Teeling, Emma; Turner-Maier, Jason; Valenzuela, Alejandro; Wagner, Franziska; Wallerman, Ola; Wang, Chao; Wang, Juehan; Weng, Zhiping; Wilder, Aryn P; Wirthlin, Morgan E; Xue, James R; Zhang, Xiaomeng