日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

PATRIC(全细菌生物信息学数据库和分析资源中心)的改进

Wattam, Alice R; Davis, James J; Assaf, Rida; Boisvert, Sébastien; Brettin, Thomas; Bun, Christopher; Conrad, Neal; Dietrich, Emily M; Disz, Terry; Gabbard, Joseph L; Gerdes, Svetlana; Henry, Christopher S; Kenyon, Ronald W; Machi, Dustin; Mao, Chunhong; Nordberg, Eric K; Olsen, Gary J; Murphy-Olson, Daniel E; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D; Shukla, Maulik; Vonstein, Veronika; Warren, Andrew; Xia, Fangfang; Yoo, Hyunseung; Stevens, Rick L

RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

RASTtk:RAST算法的模块化和可扩展实现,用于构建自定义注释流程和注释批量基因组。

Brettin, Thomas; Davis, James J; Disz, Terry; Edwards, Robert A; Gerdes, Svetlana; Olsen, Gary J; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D; Shukla, Maulik; Thomason, James A 3rd; Stevens, Rick; Vonstein, Veronika; Wattam, Alice R; Xia, Fangfang

Enabling comparative modeling of closely related genomes: example genus Brucella

实现密切相关基因组的比较建模:以布鲁氏菌属为例

Faria, José P; Edirisinghe, Janaka N; Davis, James J; Disz, Terrence; Hausmann, Anna; Henry, Christopher S; Olson, Robert; Overbeek, Ross A; Pusch, Gordon D; Shukla, Maulik; Vonstein, Veronika; Wattam, Alice R

PATRIC, the bacterial bioinformatics database and analysis resource

PATRIC,细菌生物信息学数据库和分析资源

Wattam, Alice R; Abraham, David; Dalay, Oral; Disz, Terry L; Driscoll, Timothy; Gabbard, Joseph L; Gillespie, Joseph J; Gough, Roger; Hix, Deborah; Kenyon, Ronald; Machi, Dustin; Mao, Chunhong; Nordberg, Eric K; Olson, Robert; Overbeek, Ross; Pusch, Gordon D; Shukla, Maulik; Schulman, Julie; Stevens, Rick L; Sullivan, Daniel E; Vonstein, Veronika; Warren, Andrew; Will, Rebecca; Wilson, Meredith J C; Yoo, Hyun Seung; Zhang, Chengdong; Zhang, Yan; Sobral, Bruno W

SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models

SEED 服务器:高性能访问 SEED 基因组、注释和代谢模型

Aziz, Ramy K; Devoid, Scott; Disz, Terrence; Edwards, Robert A; Henry, Christopher S; Olsen, Gary J; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D; Stevens, Rick L; Vonstein, Veronika; Xia, Fangfang

A niched Pareto genetic algorithm for finding variable length regulatory motifs in DNA sequences

一种用于在DNA序列中寻找可变长度调控基序的细分帕累托遗传算法

Sharma, Varsha; Ramawat, Kishan Gopal; Holmes, Roger S; Gogoi, Kiran; Kumaria, Suman; Tandon, Pramod; Patel, Seema; Gómez-García, Ricardo; Martínez-Ávila, Guillermo C G; Aguilar, Cristóbal N; Tripathi, Niraj; Chouhan, Devendra Singh; Saini, Navinder; Tiwari, Sharad; Pawar, Sandip V; Meena, Vachan Singh; Kaushik, Shubhangi; Kamble, Ashwini; Kumar, Sandeep; Chisti, Yusuf; Banerjee, U C; Das, Subrata K; Chakrabartty, Pran K; Mishra, Praveen Kumar; Mukherji, Suparna; Kuhar, Kalika; Kansal, Rekha; Mishra, Amit; Koundal, Kirpa Ram; Gupta, Vijay Kumar; Narayanan, Aarthi; Ramana, Karna Venkata; Gothwal, Ritu; Gupta, Aditi; Kumar, Ashwani; Sharma, Satyawati; Alappat, B J; Wee, Ching Ching; Roslan, Hairul Azman; Elmeer, Khaled; Mattat, Imene; Raksha, Sunhare; Srinivasan, Sharmila; Prasant, Garima; Prabu, Rajagopalan; Dey, Mohitosh; Bakshi, Souvika; Galiba, Gabor; Sahoo, Lingaraj; Panda, Sanjib Kumar; Mfombep, Priscilla M; Senwo, Zachary N; Bhaduri, Anwesha M; Fulekar, M H; Saini, R K; Shetty, N P; Giridhar, P; Ravishankar, G A; Patel, Seema; Goyal, Arun; Richmond, Catherine; Ujor, Victor; Ezeji, Thaddeus Chukwuemeka; Benzina, Ouafa; Frikha, Fakher; Zouari-Mechichi, Héla; Woodward, Steve; Belbahri, Lassaad; Mnif, Emna; Mechichi, Tahar; Binter, Erik; Binter, Scott; Disz, Terry; Kalmanek, Elizabeth; Powers, Alexander; Pusch, Gordon D; Turgeon, Julie; Manjasetty, Babu A; Büssow, Konrad; Panjikar, Santosh; Turnbull, Andrew P; Vijayvargiya, Shripal; Shukla, Pratyoosh

Accessing the SEED genome databases via Web services API: tools for programmers

通过 Web 服务 API 访问 SEED 基因组数据库:程序员工具

Disz, Terry; Akhter, Sajia; Cuevas, Daniel; Olson, Robert; Overbeek, Ross; Vonstein, Veronika; Stevens, Rick; Edwards, Robert A

Cohesion group approach for evolutionary analysis of TyrA, a protein family with wide-ranging substrate specificities

利用内聚群方法对具有广泛底物特异性的蛋白质家族 TyrA 进行进化分析

Bonner, Carol A; Disz, Terrence; Hwang, Kaitlyn; Song, Jian; Vonstein, Veronika; Overbeek, Ross; Jensen, Roy A

The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation

国家微生物病原体数据库资源(NMPDR):一个基于子系统注释的基因组学平台

McNeil, Leslie Klis; Reich, Claudia; Aziz, Ramy K; Bartels, Daniela; Cohoon, Matthew; Disz, Terry; Edwards, Robert A; Gerdes, Svetlana; Hwang, Kaitlyn; Kubal, Michael; Margaryan, Gohar Rem; Meyer, Folker; Mihalo, William; Olsen, Gary J; Olson, Robert; Osterman, Andrei; Paarmann, Daniel; Paczian, Tobias; Parrello, Bruce; Pusch, Gordon D; Rodionov, Dmitry A; Shi, Xinghua; Vassieva, Olga; Vonstein, Veronika; Zagnitko, Olga; Xia, Fangfang; Zinner, Jenifer; Overbeek, Ross; Stevens, Rick

Characterization of the Staphylococcus aureus heat shock, cold shock, stringent, and SOS responses and their effects on log-phase mRNA turnover

对金黄色葡萄球菌的热休克、冷休克、严格应激和SOS反应及其对对数期mRNA周转的影响进行表征

Anderson, Kelsi L; Roberts, Corbette; Disz, Terrence; Vonstein, Veronika; Hwang, Kaitlyn; Overbeek, Ross; Olson, Patrick D; Projan, Steven J; Dunman, Paul M