日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

SpiR is a gut microbial enzyme that drives cholesterol conversion

SpiR是一种肠道微生物酶,可促进胆固醇转化。

Arp, Gabriela; Levy, Sophia; Jiang, Angela K; Dufault-Thompson, Keith; Zhong, Aoshu; Grant, Maggie; Li, Yue; Jiang, Xiaofang; Hall, Brantley

LAMBDA: A Prophage Detection Benchmark for Genomic Language Models

LAMBDA:基因组语言模型的噬菌体原体检测基准

Lindsey, LeAnn M; Pershing, Nicole L; Dufault-Thompson, Keith; Gwak, Ho-Jin; Habib, Anisa; Schindler, Aaron; Rakheja, Arjun; Round, June; Stephens, W Zac; Blaschke, Anne J; Sundar, Hari; Jiang, Xiaofang

Gut bacteria metabolize natural and synthetic steroid hormones via the reductive OsrABC pathway

肠道细菌通过还原性OsrABC途径代谢天然和合成的类固醇激素。

Jacoby, Christian; Scorza, Kaylie; Ecker, Lia; Nol Bernardino, Paola; Little, Alexander S; McMillin, Mary; Ramaswamy, Ramanujam; Sundararajan, Anitha; Sidebottom, Ashley M; Lin, Huaiying; Dufault-Thompson, Keith; Hall, Brantley; Jiang, Xiaofang; Light, Samuel H

Identification of gut bacteria reductases that biotransform steroid hormones.

鉴定能够生物转化类固醇激素的肠道细菌还原酶

Arp Gabriela, Jiang Angela K, Dufault-Thompson Keith, Levy Sophia, Zhong Aoshu, Wassan Jyotsna Talreja, Grant Maggie R, Li Yue, Hall Brantley, Jiang Xiaofang

Ancestral proteins trace the emergence of substrate specificity and oligomerization within bacterial DEDDy dinucleases

祖先蛋白揭示了细菌DEDDy二核酸酶底物特异性和寡聚化的出现。

Mortensen, Sofia; Burnim, Andy; Dufault-Thompson, Keith; Lipka, Alexandra E; Jiang, Xiaofang; Sondermann, Holger

The Impact of Tokenizer Selection in Genomic Language Models

基因组语言模型中分词器选择的影响

Lindsey, LeAnn M; Pershing, Nicole L; Habib, Anisa; Dufault-Thompson, Keith; Stephens, W Zac; Blaschke, Anne J; Jiang, Xiaofang; Sundar, Hari

The impact of tokenizer selection in genomic language models

分词器选择对基因组语言模型的影响

Lindsey, LeAnn M; Pershing, Nicole L; Habib, Anisa; Dufault-Thompson, Keith; Stephens, W Zac; Blaschke, Anne J; Jiang, Xiaofang; Sundar, Hari

Bilirubin reductase shows host-specific associations in animal large intestines

胆红素还原酶在动物大肠中表现出宿主特异性关联

Dufault-Thompson, Keith; Levy, Sophia; Hall, Brantley; Jiang, Xiaofang

Annotating microbial functions with ProkFunFind

利用 ProkFunFind 对微生物功能进行注释

Dufault-Thompson, Keith; Jiang, Xiaofang

Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants

基于深度学习的大规模基因组调查揭示了菌株水平的噬菌体特异性决定因素

Yang, Yiyan; Dufault-Thompson, Keith; Yan, Wei; Cai, Tian; Xie, Lei; Jiang, Xiaofang