日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

OmniPath: integrated knowledgebase for multi-omics analysis

OmniPath:用于多组学分析的集成知识库

Türei, Dénes; Schaul, Jonathan; Palacio-Escat, Nicolàs; Bohár, Balázs; Bai, Yunfan; Ceccarelli, Francesco; Çevrim, Elif; Daley, Macabe; Darcan, Melih; Dimitrov, Daniel; Doğan, Tunca; Domingo-Fernández, Daniel; Dugourd, Aurelien; Gábor, Attila; Gul, Lejla; Hall, Benjamin A; Hoyt, Charles Tapley; Ivanova, Olga; Klein, Michal; Lawrence, Toby; Mañanes, Diego; Módos, Dezső; Müller-Dott, Sophia; Ölbei, Márton; Schmidt, Christina; Şen, Bünyamin; Theis, Fabian J; Ünlü, Atabey; Ulusoy, Erva; Valdeolivas, Alberto; Korcsmáros, Tamás; Saez-Rodriguez, Julio

Comprehensive evaluation of phosphoproteomic-based kinase activity inference

对基于磷酸化蛋白质组学的激酶活性推断进行全面评估

Müller-Dott, Sophia; Jaehnig, Eric J; Munchic, Khoi Pham; Jiang, Wen; Yaron-Barir, Tomer M; Savage, Sara R; Garrido-Rodriguez, Martin; Johnson, Jared L; Lussana, Alessandro; Petsalaki, Evangelia; Lei, Jonathan T; Dugourd, Aurelien; Krug, Karsten; Cantley, Lewis C; Mani, D R; Zhang, Bing; Saez-Rodriguez, Julio

Publisher Correction: Comprehensive evaluation of phosphoproteomic-based kinase activity inference

出版商更正:对基于磷酸化蛋白质组学的激酶活性推断进行全面评估

Müller-Dott, Sophia; Jaehnig, Eric J; Munchic, Khoi Pham; Jiang, Wen; Yaron-Barir, Tomer M; Savage, Sara R; Garrido-Rodriguez, Martin; Johnson, Jared L; Lussana, Alessandro; Petsalaki, Evangelia; Lei, Jonathan T; Dugourd, Aurelien; Krug, Karsten; Cantley, Lewis C; Mani, D R; Zhang, Bing; Saez-Rodriguez, Julio

LIANA+ provides an all-in-one framework for cell-cell communication inference

LIANA+ 提供了一个用于推断细胞间通讯的一体化框架

Dimitrov, Daniel; Schäfer, Philipp Sven Lars; Farr, Elias; Rodriguez-Mier, Pablo; Lobentanzer, Sebastian; Badia-I-Mompel, Pau; Dugourd, Aurelien; Tanevski, Jovan; Ramirez Flores, Ricardo Omar; Saez-Rodriguez, Julio

MetalinksDB: a flexible and contextualizable resource of metabolite-protein interactions

MetalinksDB:一个灵活且可上下文关联的代谢物-蛋白质相互作用资源。

Farr, Elias; Dimitrov, Daniel; Schmidt, Christina; Turei, Denes; Lobentanzer, Sebastian; Dugourd, Aurelien; Saez-Rodriguez, Julio

A single-sample workflow for joint metabolomic and proteomic analysis of clinical specimens

用于临床标本代谢组学和蛋白质组学联合分析的单样本工作流程

Gegner, Hagen M; Naake, Thomas; Aljakouch, Karim; Dugourd, Aurelien; Kliewer, Georg; Müller, Torsten; Schilling, Dustin; Schneider, Marc A; Kunze-Rohrbach, Nina; Grünewald, Thomas G P; Hell, Rüdiger; Saez-Rodriguez, Julio; Huber, Wolfgang; Poschet, Gernot; Krijgsveld, Jeroen

Pan-Cancer landscape of protein activities identifies drivers of signalling dysregulation and patient survival.

泛癌蛋白质活性图谱揭示了信号失调和患者生存的驱动因素

Sousa Abel, Dugourd Aurelien, Memon Danish, Petursson Borgthor, Petsalaki Evangelia, Saez-Rodriguez Julio, Beltrao Pedro

Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches

利用计算系统生物学方法识别 COVID-19 疾病机制中的药物靶点

Niarakis, Anna; Ostaszewski, Marek; Mazein, Alexander; Kuperstein, Inna; Kutmon, Martina; Gillespie, Marc E; Funahashi, Akira; Acencio, Marcio Luis; Hemedan, Ahmed; Aichem, Michael; Klein, Karsten; Czauderna, Tobias; Burtscher, Felicia; Yamada, Takahiro G; Hiki, Yusuke; Hiroi, Noriko F; Hu, Finterly; Pham, Nhung; Ehrhart, Friederike; Willighagen, Egon L; Valdeolivas, Alberto; Dugourd, Aurelien; Messina, Francesco; Esteban-Medina, Marina; Peña-Chilet, Maria; Rian, Kinza; Soliman, Sylvain; Aghamiri, Sara Sadat; Puniya, Bhanwar Lal; Naldi, Aurélien; Helikar, Tomáš; Singh, Vidisha; Fernández, Marco Fariñas; Bermudez, Viviam; Tsirvouli, Eirini; Montagud, Arnau; Noël, Vincent; Ponce-de-Leon, Miguel; Maier, Dieter; Bauch, Angela; Gyori, Benjamin M; Bachman, John A; Luna, Augustin; Piñero, Janet; Furlong, Laura I; Balaur, Irina; Rougny, Adrien; Jarosz, Yohan; Overall, Rupert W; Phair, Robert; Perfetto, Livia; Matthews, Lisa; Rex, Devasahayam Arokia Balaya; Orlic-Milacic, Marija; Gomez, Luis Cristobal Monraz; De Meulder, Bertrand; Ravel, Jean Marie; Jassal, Bijay; Satagopam, Venkata; Wu, Guanming; Golebiewski, Martin; Gawron, Piotr; Calzone, Laurence; Beckmann, Jacques S; Evelo, Chris T; D'Eustachio, Peter; Schreiber, Falk; Saez-Rodriguez, Julio; Dopazo, Joaquin; Kuiper, Martin; Valencia, Alfonso; Wolkenhauer, Olaf; Kitano, Hiroaki; Barillot, Emmanuel; Auffray, Charles; Balling, Rudi; Schneider, Reinhard

decoupleR: ensemble of computational methods to infer biological activities from omics data

decoupleR:用于从组学数据推断生物活性的计算方法集合

Badia-I-Mompel, Pau; Vélez Santiago, Jesús; Braunger, Jana; Geiss, Celina; Dimitrov, Daniel; Müller-Dott, Sophia; Taus, Petr; Dugourd, Aurelien; Holland, Christian H; Ramirez Flores, Ricardo O; Saez-Rodriguez, Julio

FUNKI: interactive functional footprint-based analysis of omics data

FUNKI:基于交互式功能足迹的组学数据分析

Hernansaiz-Ballesteros, Rosa; Holland, Christian H; Dugourd, Aurelien; Saez-Rodriguez, Julio