日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Evaluating genome assemblies with HMM-Flagger

使用 HMM-Flagger 评估基因组组装

Asri, Mobin; Eizenga, Jordan M; Hebbar, Prajna; Real, Taylor D; Lucas, Julian; Loucks, Hailey; Calicchio, Alessandro; Diekhans, Mark; Eichler, Evan E; Salama, Sofie; Miga, Karen H; Paten, Benedict

Divergent genetic architecture of cold stress tolerance in aus and tropical japonica rice

澳洲和热带粳稻耐寒性遗传结构的差异

Eizenga, Georgia C; Santamaria, Yami; Jackson, Aaron K; Phan, Huy; Jia, Melissa H; Grunden, Quynh P-H; Edwards, Jeremy D; Himelblau, Ed; Schläppi, Michael R

Multi-Experiment and Multi-Locus Genome-Wide Association Mapping for Grain Arsenic in Rice Population

水稻群体中籽粒砷的多实验多位点全基因组关联作图

Chen, Caijin; Ruang-Areerate, Panthita; Travis, Anthony J; Douglas, Alex; Salt, David E; Pinson, Shannon R M; Eizenga, Georgia C; Price, Adam H; Norton, Gareth J

Rapid, accurate long- and short-read mapping to large pangenome graphs with vg Giraffe

使用 vg Giraffe 实现快速、准确的长读和短读比对到大型泛基因组图谱。

Chang, Xian; Novak, Adam M; Eizenga, Jordan M; Sirén, Jouni; Monlong, Jean; Negi, Shloka; Andreace, Francesco; Nag, Sagorika; Kyriakidis, Konstantinos; Hickey, Glenn; Hwang, Stephen; Délot, Emmanuèle C; Carroll, Andrew; Shafin, Kishwar; Chang, Pi-Chuan; Okamoto, Faith; Paten, Benedict

Rapid, accurate long- and short-read mapping to large pangenome graphs with vg Giraffe

使用 vg Giraffe 实现快速、准确的长读和短读比对到大型泛基因组图谱。

Chang, Xian; Novak, Adam M; Eizenga, Jordan M; Sirén, Jouni; Monlong, Jean; Negi, Shloka; Andreace, Francesco; Nag, Sagorika; Kyriakidis, Konstantinos; Hickey, Glenn; Hwang, Stephen; Délot, Emmanuèle C; Carroll, Andrew; Shafin, Kishwar; Chang, Pi-Chuan; Okamoto, Faith; Paten, Benedict

Complete genomes of a multi-generational pedigree to expand studies of genetic and epigenetic inheritance.

对多代家系进行全基因组测序,以扩展对遗传和表观遗传的研究。

Cechova Monika, Potapova Tamara A, Rechtsteiner Andreas, Hickey Glenn, Mari Rebecca Serra, Mastoras Mira, Menendez Julian, Poláková Nikol, Hebbar Prajna, Ryabov Fedor, Loucks Hailey, Groot Aljona, Pavlík Tomáš, Asri Mobin, Dong Shihua, Yan Stephanie M, Lucas Julian K, Solar Steven J, Borchers Matthew, Mattingly Mark, McKinney Sean, Krátká Marie, Mikhailova Catherine, Hanák Ondřej, Saha Sohinee Tiffany, Xu Emily, Antipov Dmitry, Koren Sergey, Eizenga Jordan M, McNulty Brandy, Gardner Joshua M V, Hillaker Todd, Violich Ivo, Markovic Christopher, Kruglyak Semyon, Levy Shawn, Wolf Trevor, Mitchell Matthew W, Scheinfeldt Laura, Cheng Haoyu, Alexandrov Ivan A, McCoy Rajiv C, Paten Benedict, Phillippy Adam M, Zook Justin M, Gerton Jennifer L, Fulton Robert S, Stitziel Nathan O, Wang Ting, Marschall Tobias, Greider Carol W, Miga Karen H

Convergent evolution of plant prickles by repeated gene co-option over deep time

植物刺的趋同进化是通过漫长岁月中反复的基因共选实现的。

Satterlee, James W; Alonso, David; Gramazio, Pietro; Jenike, Katharine M; He, Jia; Arrones, Andrea; Villanueva, Gloria; Plazas, Mariola; Ramakrishnan, Srividya; Benoit, Matthias; Gentile, Iacopo; Hendelman, Anat; Shohat, Hagai; Fitzgerald, Blaine; Robitaille, Gina M; Green, Yumi; Swartwood, Kerry; Passalacqua, Michael J; Gagnon, Edeline; Hilgenhof, Rebecca; Huggins, Trevis D; Eizenga, Georgia C; Gur, Amit; Rutten, Twan; Stein, Nils; Yao, Shengrui; Poncet, Adrien; Bellot, Clement; Frary, Amy; Knapp, Sandra; Bendahmane, Mohammed; Särkinen, Tiina; Gillis, Jesse; Van Eck, Joyce; Schatz, Michael C; Eshed, Yuval; Prohens, Jaime; Vilanova, Santiago; Lippman, Zachary B

Pangenome graph construction from genome alignments with Minigraph-Cactus

利用 Minigraph-Cactus 从基因组比对构建泛基因组图

Hickey, Glenn; Monlong, Jean; Ebler, Jana; Novak, Adam M; Eizenga, Jordan M; Gao, Yan; Marschall, Tobias; Li, Heng; Paten, Benedict

Personalized pangenome references

个性化泛基因组参考

Sirén, Jouni; Eskandar, Parsa; Ungaro, Matteo Tommaso; Hickey, Glenn; Eizenga, Jordan M; Novak, Adam M; Chang, Xian; Chang, Pi-Chuan; Kolmogorov, Mikhail; Carroll, Andrew; Monlong, Jean; Paten, Benedict

Beyond the Human Genome Project: The Age of Complete Human Genome Sequences and Pangenome References

超越人类基因组计划:完整人类基因组序列和泛基因组参考的时代

Taylor, Dylan J; Eizenga, Jordan M; Li, Qiuhui; Das, Arun; Jenike, Katharine M; Kenny, Eimear E; Miga, Karen H; Monlong, Jean; McCoy, Rajiv C; Paten, Benedict; Schatz, Michael C