日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Classification of non-TCGA cancer samples to TCGA molecular subtypes using compact feature sets

利用紧凑特征集将非TCGA癌症样本分类到TCGA分子亚型

Ellrott, Kyle; Wong, Christopher K; Yau, Christina; Castro, Mauro A A; Lee, Jordan A; Karlberg, Brian J; Grewal, Jasleen K; Lagani, Vincenzo; Tercan, Bahar; Friedl, Verena; Hinoue, Toshinori; Uzunangelov, Vladislav; Westlake, Lindsay; Loinaz, Xavier; Felau, Ina; Wang, Peggy I; Kemal, Anab; Caesar-Johnson, Samantha J; Shmulevich, Ilya; Lazar, Alexander J; Tsamardinos, Ioannis; Hoadley, Katherine A; Robertson, A Gordon; Knijnenburg, Theo A; Benz, Christopher C; Stuart, Joshua M; Zenklusen, Jean C; Cherniack, Andrew D; Laird, Peter W

Three-dimensional genome landscape of primary human cancers.

人类原发性癌症的三维基因组图谱

Yost Kathryn E, Zhao Yanding, Hung King L, Zhu Kaiyuan, Xu Duo, Corces M Ryan, Shams Shadi, Louie Bryan H, Sarmashghi Shahab, Sundaram Laksshman, Luebeck Jens, Clarke Stanley, Doane Ashley S, Granja Jeffrey M, Choudhry Hani, Imieliński Marcin, Cherniack Andrew D, Khurana Ekta, Bafna Vineet, Felau Ina, Zenklusen Jean C, Laird Peter W, Curtis Christina, Greenleaf William J, Chang Howard Y

Pan-cancer immune and stromal deconvolution predicts clinical outcomes and mutation profiles

泛癌免疫和基质去卷积预测临床结果和突变谱

Bhinder, Bhavneet; Friedl, Verena; Sethuraman, Sunantha; Risso, Davide; Chiotti, Kami E; Mashl, R Jay; Ellrott, Kyle P; Lee, Jordan A; Wong, Christopher K; Gyan, Kofi; Deshpande, Aditya; Imielinski, Marcin; Bareja, Rohan; Stuart, Josh; Peto, Myron; Hoadley, Katherine A; Lazar, Alexander J; Cherniack, Andrew D; Zhu, Jingchun; Cao, Shaolong; Rubin, Mark; Wang, Wenyi; Bathe, Oliver F; Robine, Nicolas; Ding, Li; Laird, Peter W; Zhou, Wanding; Shen, Hui; Thorsson, Vésteinn; Yeh, Jen Jen; Bailey, Matthew H; Zhou, Daniel Cui; Peng, Xianlu L; Goldman, Mary; Li, Yongsheng; Korkut, Anil; Sahni, Nidhi; Hayes, D Neil; Mensah, Michael K A; Felau, Ina; Kemal, Anab; Caesar-Johnson, Samantha; Demchok, John A; Yang, Liming; Ferguson, Martin L; Tarnuzzer, Roy; Wang, Zhining; Zenklusen, Jean C; Spellman, Paul; Elemento, Olivier

Single-cell chromatin accessibility reveals malignant regulatory programs in primary human cancers

单细胞染色质可及性揭示原发性人类癌症中的恶性调控程序

Sundaram, Laksshman; Kumar, Arvind; Zatzman, Matthew; Salcedo, Adriana; Ravindra, Neal; Shams, Shadi; Louie, Bryan H; Bagdatli, S Tansu; Myers, Matthew A; Sarmashghi, Shahab; Choi, Hyo Young; Choi, Won-Young; Yost, Kathryn E; Zhao, Yanding; Granja, Jeffrey M; Hinoue, Toshinori; Hayes, D Neil; Cherniack, Andrew; Felau, Ina; Choudhry, Hani; Zenklusen, Jean C; Farh, Kyle Kai-How; McPherson, Andrew; Curtis, Christina; Laird, Peter W; Demchok, John A; Yang, Liming; Tarnuzzer, Roy; Caesar-Johnson, Samantha J; Wang, Zhining; Doane, Ashley S; Khurana, Ekta; Castro, Mauro A A; Lazar, Alexander J; Broom, Bradley M; Weinstein, John N; Akbani, Rehan; Kumar, Shwetha V; Raphael, Benjamin J; Wong, Christopher K; Stuart, Joshua M; Safavi, Rojin; Benz, Christopher C; Johnson, Benjamin K; Kyi, Cindy; Shen, Hui; Corces, M Ryan; Chang, Howard Y; Greenleaf, William J

Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway

对RTK/RAS/RAF通路无改变的肺腺癌进行全基因组表征。

Carrot-Zhang, Jian; Yao, Xiaotong; Devarakonda, Siddhartha; Deshpande, Aditya; Damrauer, Jeffrey S; Silva, Tiago Chedraoui; Wong, Christopher K; Choi, Hyo Young; Felau, Ina; Robertson, A Gordon; Castro, Mauro A A; Bao, Lisui; Rheinbay, Esther; Liu, Eric Minwei; Trieu, Tuan; Haan, David; Yau, Christina; Hinoue, Toshinori; Liu, Yuexin; Shapira, Ofer; Kumar, Kiran; Mungall, Karen L; Zhang, Hailei; June-Koo Lee, Jake; Berger, Ashton; Gao, Galen F; Zhitomirsky, Binyamin; Liang, Wen-Wei; Zhou, Meng; Moorthi, Sitapriya; Berger, Alice H; Collisson, Eric A; Zody, Michael C; Ding, Li; Cherniack, Andrew D; Getz, Gad; Elemento, Olivier; Benz, Christopher C; Stuart, Josh; Zenklusen, J C; Beroukhim, Rameen; Chang, Jason C; Campbell, Joshua D; Hayes, D Neil; Yang, Lixing; Laird, Peter W; Weinstein, John N; Kwiatkowski, David J; Tsao, Ming S; Travis, William D; Khurana, Ekta; Berman, Benjamin P; Hoadley, Katherine A; Robine, Nicolas; Meyerson, Matthew; Govindan, Ramaswamy; Imielinski, Marcin

Whole-genome characterization of lung adenocarcinomas lacking the RTK/RAS/RAF pathway

对缺乏 RTK/RAS/RAF 通路的肺腺癌进行全基因组表征。

Carrot-Zhang, Jian; Yao, Xiaotong; Devarakonda, Siddhartha; Deshpande, Aditya; Damrauer, Jeffrey S; Silva, Tiago Chedraoui; Wong, Christopher K; Choi, Hyo Young; Felau, Ina; Robertson, A Gordon; Castro, Mauro A A; Bao, Lisui; Rheinbay, Esther; Liu, Eric Minwei; Trieu, Tuan; Haan, David; Yau, Christina; Hinoue, Toshinori; Liu, Yuexin; Shapira, Ofer; Kumar, Kiran; Mungall, Karen L; Zhang, Hailei; Lee, Jake June-Koo; Berger, Ashton; Gao, Galen F; Zhitomirsky, Binyamin; Liang, Wen-Wei; Zhou, Meng; Moorthi, Sitapriya; Berger, Alice H; Collisson, Eric A; Zody, Michael C; Ding, Li; Cherniack, Andrew D; Getz, Gad; Elemento, Olivier; Benz, Christopher C; Stuart, Josh; Zenklusen, J C; Beroukhim, Rameen; Chang, Jason C; Campbell, Joshua D; Hayes, D Neil; Yang, Lixing; Laird, Peter W; Weinstein, John N; Kwiatkowski, David J; Tsao, Ming S; Travis, William D; Khurana, Ekta; Berman, Benjamin P; Hoadley, Katherine A; Robine, Nicolas; Meyerson, Matthew; Govindan, Ramaswamy; Imielinski, Marcin

Comprehensive Analysis of Genetic Ancestry and Its Molecular Correlates in Cancer

癌症中遗传祖先及其分子相关性的综合分析

Carrot-Zhang, Jian; Chambwe, Nyasha; Damrauer, Jeffrey S; Knijnenburg, Theo A; Robertson, A Gordon; Yau, Christina; Zhou, Wanding; Berger, Ashton C; Huang, Kuan-Lin; Newberg, Justin Y; Mashl, R Jay; Romanel, Alessandro; Sayaman, Rosalyn W; Demichelis, Francesca; Felau, Ina; Frampton, Garrett M; Han, Seunghun; Hoadley, Katherine A; Kemal, Anab; Laird, Peter W; Lazar, Alexander J; Le, Xiuning; Oak, Ninad; Shen, Hui; Wong, Christopher K; Zenklusen, Jean C; Ziv, Elad; Cherniack, Andrew D; Beroukhim, Rameen

Epigenetically facilitated mutational assimilation: epigenetics as a hub within the inclusive evolutionary synthesis

表观遗传促进突变同化:表观遗传学作为包容性进化综合的核心

Corces, M Ryan; Granja, Jeffrey M; Shams, Shadi; Louie, Bryan H; Seoane, Jose A; Zhou, Wanding; Silva, Tiago C; Groeneveld, Clarice; Wong, Christopher K; Cho, Seung Woo; Satpathy, Ansuman T; Mumbach, Maxwell R; Hoadley, Katherine A; Robertson, A Gordon; Sheffield, Nathan C; Felau, Ina; Castro, Mauro A A; Berman, Benjamin P; Staudt, Louis M; Zenklusen, Jean C; Laird, Peter W; Curtis, Christina; Greenleaf, William J; Chang, Howard Y; Danchin, Etienne; Pocheville, Arnaud; Rey, Olivier; Pujol, Benoit; Blanchet, Simon

Before and After: Comparison of Legacy and Harmonized TCGA Genomic Data Commons' Data

前后对比:传统TCGA基因组数据与统一TCGA基因组数据共享平台数据的比较

Gao, Galen F; Parker, Joel S; Reynolds, Sheila M; Silva, Tiago C; Wang, Liang-Bo; Zhou, Wanding; Akbani, Rehan; Bailey, Matthew; Balu, Saianand; Berman, Benjamin P; Brooks, Denise; Chen, Hu; Cherniack, Andrew D; Demchok, John A; Ding, Li; Felau, Ina; Gaheen, Sharon; Gerhard, Daniela S; Heiman, David I; Hernandez, Kyle M; Hoadley, Katherine A; Jayasinghe, Reyka; Kemal, Anab; Knijnenburg, Theo A; Laird, Peter W; Mensah, Michael K A; Mungall, Andrew J; Robertson, A Gordon; Shen, Hui; Tarnuzzer, Roy; Wang, Zhining; Wyczalkowski, Matthew; Yang, Liming; Zenklusen, Jean C; Zhang, Zhenyu; Liang, Han; Noble, Michael S

Integrative Molecular Characterization of Malignant Pleural Mesothelioma

恶性胸膜间皮瘤的整合分子特征分析

Hmeljak, Julija; Sanchez-Vega, Francisco; Hoadley, Katherine A; Shih, Juliann; Stewart, Chip; Heiman, David; Tarpey, Patrick; Danilova, Ludmila; Drill, Esther; Gibb, Ewan A; Bowlby, Reanne; Kanchi, Rupa; Osmanbeyoglu, Hatice U; Sekido, Yoshitaka; Takeshita, Jumpei; Newton, Yulia; Graim, Kiley; Gupta, Manaswi; Gay, Carl M; Diao, Lixia; Gibbs, David L; Thorsson, Vesteinn; Iype, Lisa; Kantheti, Havish; Severson, David T; Ravegnini, Gloria; Desmeules, Patrice; Jungbluth, Achim A; Travis, William D; Dacic, Sanja; Chirieac, Lucian R; Galateau-Sallé, Françoise; Fujimoto, Junya; Husain, Aliya N; Silveira, Henrique C; Rusch, Valerie W; Rintoul, Robert C; Pass, Harvey; Kindler, Hedy; Zauderer, Marjorie G; Kwiatkowski, David J; Bueno, Raphael; Tsao, Anne S; Creaney, Jenette; Lichtenberg, Tara; Leraas, Kristen; Bowen, Jay; Felau, Ina; Zenklusen, Jean Claude; Akbani, Rehan; Cherniack, Andrew D; Byers, Lauren A; Noble, Michael S; Fletcher, Jonathan A; Robertson, A Gordon; Shen, Ronglai; Aburatani, Hiroyuki; Robinson, Bruce W; Campbell, Peter; Ladanyi, Marc