Fostier Jan相关文献与解析，生知库 | 链接生命科学的每一步

日期影响因子

Run-length compressed metagenomic read classification with SMEM-finding and tagging

基于SMEM查找和标记的运行长度压缩宏基因组读段分类

期刊:iScience

影响因子:4.1

doi:10.1016/j.isci.2025.114029

Depuydt, Lore; Ahmed, Omar Y; Fostier, Jan; Langmead, Ben; Gagie, Travis

发表日期：2025

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b-move: faster lossless approximate pattern matching in a run-length compressed index

b-move：在游程压缩索引中实现更快的无损近似模式匹配

期刊:Algorithms for Molecular Biology

影响因子:1.7

doi:10.1186/s13015-025-00281-x

Depuydt, Lore; Renders, Luca; Van de Vyver, Simon; Veys, Lennart; Gagie, Travis; Fostier, Jan

发表日期：2025

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Columba: fast approximate pattern matching with optimized search schemes

Columba：采用优化搜索方案的快速近似模式匹配

doi:10.1093/bioinformatics/btaf652

Renders, Luca; Depuydt, Lore; Gagie, Travis; Fostier, Jan

发表日期：2025

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Run-length compressed metagenomic read classification with SMEM-finding and tagging

基于SMEM查找和标记的运行长度压缩宏基因组读段分类

doi:10.1101/2025.02.25.640119

Depuydt, Lore; Ahmed, Omar Y; Fostier, Jan; Langmead, Ben; Gagie, Travis

发表日期：2025

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ELLIPSIS: robust quantification of splicing in scRNA-seq

ELLIPSIS：scRNA-seq中剪接的稳健定量

doi:10.1093/bioinformatics/btaf028

Van Hecke, Marie; Beerenwinkel, Niko; Lootens, Thibault; Fostier, Jan; Raedt, Robrecht; Marchal, Kathleen

发表日期：2025

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Faster Maximal Exact Matches with Lazy LCP Evaluation

利用惰性LCP评估实现更快的最大精确匹配

doi:10.1109/dcc58796.2024.00020

Goga, Adrián; Depuydt, Lore; Brown, Nathaniel K; Fostier, Jan; Gagie, Travis; Navarro, Gonzalo

发表日期：2024

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b-move: faster bidirectional character extensions in a run-length compressed index

b-move：在游程压缩索引中实现更快的双向字符扩展

doi:10.1101/2024.05.30.596587

Depuydt, Lore; Renders, Luca; de Vyver, Simon Van; Veys, Lennart; Gagie, Travis; Fostier, Jan

发表日期：2024

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b-move: Faster Lossless Approximate Pattern Matching in a Run-Length Compressed Index

b-move：在游程压缩索引中实现更快的无损近似模式匹配

doi:10.21203/rs.3.rs-5367343/v1

Depuydt, Lore; Renders, Luca; Van de Vyver, Simon; Veys, Lennart; Gagie, Travis; Fostier, Jan

发表日期：2024

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Oracle selection provides insight into how far off practice is from Utopia in plant breeding

预测模型的选择能够帮助我们了解植物育种的实践与理想状态之间的差距。

期刊:Frontiers in Plant Science

影响因子:4.8

doi:10.3389/fpls.2023.1218665

Vanavermaete, David; Maenhout, Steven; Fostier, Jan; De Baets, Bernard

发表日期：2023

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Pan-genome de Bruijn graph using the bidirectional FM-index

使用双向 FM 索引的泛基因组 de Bruijn 图

期刊:BMC Bioinformatics

影响因子:3.3

doi:10.1186/s12859-023-05531-6

Depuydt, Lore; Renders, Luca; Abeel, Thomas; Fostier, Jan

发表日期：2023

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