日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

MaAsLin 3: refining and extending generalized multivariable linear models for meta-omic association discovery

MaAsLin 3:改进和扩展用于元组学关联发现的广义多变量线性模型

Nickols, William A; Kuntz, Thomas; Shen, Jiaxian; Maharjan, Sagun; Mallick, Himel; Franzosa, Eric A; Thompson, Kelsey N; Nearing, Jacob T; Huttenhower, Curtis

Enhanced multi-omic viral profiling from microbial community sequencing with BAQLaVa

利用BAQLaVa技术从微生物群落测序中增强多组学病毒分析

Jensen, Jordan S L; Maharjan, Sagun; Münch, Philipp C; Shen, Jiaxian; Bowcutt, Bailey; Sumner, Jack T; Morgan, Xochitl C; Thompson, Kelsey N; Nguyen, Long H; Franzosa, Eric A; Huttenhower, Curtis

Multi-omic analysis reveals transkingdom gut dysbiosis in metabolic dysfunction-associated steatotic liver disease

多组学分析揭示代谢功能障碍相关脂肪肝疾病中跨界肠道菌群失调

Kim, Hanseul; Nelson, Paul; Nzabarushimana, Etienne; Shen, Jiaxian; Jensen, Jordan; Bhosle, Amrisha; Li, Chengchen; Lee, Nawon; Everett, Christine; Berdy, Brittany; Frongillo, Giana; Livny, Jonathan; Hu, Frank B; Simon, Tracey G; McIver, Lauren; Franzosa, Eric A; Chan, Andrew T; Hayete, Boris; Thompson, Kelsey N; Huttenhower, Curtis; Nguyen, Long H

Capturing sequence ambiguity among taxa in a primer-specific manner to improve taxonomic classification of amplicon sequencing

以引物特异性方式捕获分类群间的序列歧义,以改进扩增子测序的分类学鉴定

Nearing, Jacob T; Thompson, Kelsey N; Kuntz, Thomas; Louyakis, Artemis S; Bhosle, Amrisha; Branck, Tobyn; Badri, Dayakar V; Franzosa, Eric A; Brockel, Christoph; Huttenhower, Curtis; Short, Meghan I

Virulence factor discovery identifies associations between the Fic gene family and Fap2(+) fusobacteria in colorectal cancer microbiomes

毒力因子发现揭示了Fic基因家族与结直肠癌微生物组中Fap2(+)梭杆菌之间的关联

Nakatsu, Geicho; Ko, Duhyun; Michaud, Monia; Franzosa, Eric A; Morgan, Xochitl C; Huttenhower, Curtis; Garrett, Wendy S

Response of the gut microbiome and metabolome to dietary fiber in healthy dogs

健康犬肠道微生物组和代谢组对膳食纤维的反应

Bhosle, Amrisha; Jackson, Matthew I; Walsh, Aaron M; Franzosa, Eric A; Badri, Dayakar V; Huttenhower, Curtis

A Small-Molecule Inhibitor of Gut Bacterial Urease Protects the Host from Liver Injury

一种小分子肠道细菌尿素酶抑制剂可保护宿主免受肝损伤

Richards-Corke, Khyle C; Jiang, Yindi; Yeliseyev, Vladimir; Zhang, Yancong; Franzosa, Eric A; Wang, Zhipeng A; Yapa Abeywardana, Maheeshi; Cole, Phillip A; Huttenhower, Curtis; Bry, Lynn; Balskus, Emily P

Quantifying Metagenomic Strain Associations from Microbiomes with Anpan

利用Anpan量化微生物组中的宏基因组菌株关联

Ghazi, Andrew R; Thompson, Kelsey N; Bhosle, Amrisha; Mei, Zhendong; Yan, Yan; Wang, Fenglei; Wang, Kai; Franzosa, Eric A; Huttenhower, Curtis

Coffee consumption is associated with intestinal Lawsonibacter asaccharolyticus abundance and prevalence across multiple cohorts

多项研究表明,咖啡摄入与肠道中无糖劳森杆菌的丰度和流行率相关。

Manghi, Paolo; Bhosle, Amrisha; Wang, Kai; Marconi, Roberta; Selma-Royo, Marta; Ricci, Liviana; Asnicar, Francesco; Golzato, Davide; Ma, Wenjie; Hang, Dong; Thompson, Kelsey N; Franzosa, Eric A; Nabinejad, Amir; Tamburini, Sabrina; Rimm, Eric B; Garrett, Wendy S; Sun, Qi; Chan, Andrew T; Valles-Colomer, Mireia; Arumugam, Manimozhiyan; Bermingham, Kate M; Giordano, Francesca; Davies, Richard; Hadjigeorgiou, George; Wolf, Jonathan; Strowig, Till; Berry, Sarah E; Huttenhower, Curtis; Spector, Tim D; Segata, Nicola; Song, Mingyang

Optimized model architectures for deep learning on genomic data

针对基因组数据深度学习的优化模型架构

Gündüz, Hüseyin Anil; Mreches, René; Moosbauer, Julia; Robertson, Gary; To, Xiao-Yin; Franzosa, Eric A; Huttenhower, Curtis; Rezaei, Mina; McHardy, Alice C; Bischl, Bernd; Münch, Philipp C; Binder, Martin