日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

High-quality mouse reference genomes reveal the structural complexity of the murine protein-coding landscape

高质量的小鼠参考基因组揭示了小鼠蛋白质编码图谱的结构复杂性

Helmy, Mohab; Li, Jin U; Yan, Xinyu F; Meade, Rachel K; Anderson, Elizabeth; Chen, Patrick B; Czechanski, Anne M; Di Domenico, Tomás; Flint, Jonathan; Garrison, Erik; Gontijo, Marco T P; Guarracino, Andrea; Haggerty, Leanne; Heard, Edith; Howe, Kerstin; Meena, Narendra; Martin, Fergal J; Miska, Eric A; Rall, Isabell; Ramakrishna, Navin B; Sapetschnig, Alexandra; Sinha, Swati; Sun, Diandian; Tricomi, Francesca F; Qu, Runjia; Wood, Jonathan M D; Wu, Tianzhen; Zhou, Dian J; Reinholdt, Laura; Adams, David J; Smith, Clare M; Lilue, Jingtao; Keane, Thomas M

Adaptive Tracepoints for Pangenome Alignment Compression

用于泛基因组比对压缩的自适应轨迹点

Kaushan, Hasitha; Marco-Sola, Santiago; Garrison, Erik; Prins, Pjotr; Guarracino, Andrea

Complete sequencing of ape genomes

猿类基因组的完全测序

Yoo, DongAhn; Rhie, Arang; Hebbar, Prajna; Antonacci, Francesca; Logsdon, Glennis A; Solar, Steven J; Antipov, Dmitry; Pickett, Brandon D; Safonova, Yana; Montinaro, Francesco; Luo, Yanting; Malukiewicz, Joanna; Storer, Jessica M; Lin, Jiadong; Sequeira, Abigail N; Mangan, Riley J; Hickey, Glenn; Monfort Anez, Graciela; Balachandran, Parithi; Bankevich, Anton; Beck, Christine R; Biddanda, Arjun; Borchers, Matthew; Bouffard, Gerard G; Brannan, Emry; Brooks, Shelise Y; Carbone, Lucia; Carrel, Laura; Chan, Agnes P; Crawford, Juyun; Diekhans, Mark; Engelbrecht, Eric; Feschotte, Cedric; Formenti, Giulio; Garcia, Gage H; de Gennaro, Luciana; Gilbert, David; Green, Richard E; Guarracino, Andrea; Gupta, Ishaan; Haddad, Diana; Han, Junmin; Harris, Robert S; Hartley, Gabrielle A; Harvey, William T; Hiller, Michael; Hoekzema, Kendra; Houck, Marlys L; Jeong, Hyeonsoo; Kamali, Kaivan; Kellis, Manolis; Kille, Bryce; Lee, Chul; Lee, Youngho; Lees, William; Lewis, Alexandra P; Li, Qiuhui; Loftus, Mark; Loh, Yong Hwee Eddie; Loucks, Hailey; Ma, Jian; Mao, Yafei; Martinez, Juan F I; Masterson, Patrick; McCoy, Rajiv C; McGrath, Barbara; McKinney, Sean; Meyer, Britta S; Miga, Karen H; Mohanty, Saswat K; Munson, Katherine M; Pal, Karol; Pennell, Matt; Pevzner, Pavel A; Porubsky, David; Potapova, Tamara; Ringeling, Francisca R; Rocha, Joana L; Ryder, Oliver A; Sacco, Samuel; Saha, Swati; Sasaki, Takayo; Schatz, Michael C; Schork, Nicholas J; Shanks, Cole; Smeds, Linnéa; Son, Dongmin R; Steiner, Cynthia; Sweeten, Alexander P; Tassia, Michael G; Thibaud-Nissen, Françoise; Torres-González, Edmundo; Trivedi, Mihir; Wei, Wenjie; Wertz, Julie; Yang, Muyu; Zhang, Panpan; Zhang, Shilong; Zhang, Yang; Zhang, Zhenmiao; Zhao, Sarah A; Zhu, Yixin; Jarvis, Erich D; Gerton, Jennifer L; Rivas-González, Iker; Paten, Benedict; Szpiech, Zachary A; Huber, Christian D; Lenz, Tobias L; Konkel, Miriam K; Yi, Soojin V; Canzar, Stefan; Watson, Corey T; Sudmant, Peter H; Molloy, Erin; Garrison, Erik; Lowe, Craig B; Ventura, Mario; O'Neill, Rachel J; Koren, Sergey; Makova, Kateryna D; Phillippy, Adam M; Eichler, Evan E

The formation and propagation of human Robertsonian chromosomes

人类罗伯逊染色体的形成和传播

de Lima, Leonardo Gomes; Guarracino, Andrea; Koren, Sergey; Potapova, Tamara; McKinney, Sean; Rhie, Arang; Solar, Steven J; Seidel, Chris; Fagen, Brandon L; Walenz, Brian P; Bouffard, Gerard G; Brooks, Shelise Y; Peterson, Michael; Hall, Kate; Crawford, Juyun; Young, Alice C; Pickett, Brandon D; Garrison, Erik; Phillippy, Adam M; Gerton, Jennifer L

Leveraging a phased pangenome for haplotype design of hybrid potato

利用分相泛基因组进行杂交马铃薯单倍型设计

Cheng, Lin; Wang, Nan; Bao, Zhigui; Zhou, Qian; Guarracino, Andrea; Yang, Yuting; Wang, Pei; Zhang, Zhiyang; Tang, Dié; Zhang, Pingxian; Wu, Yaoyao; Zhou, Yao; Zheng, Yi; Hu, Yong; Lian, Qun; Ma, Zhaoxu; Lassois, Ludivine; Zhang, Chunzhi; Lucas, William J; Garrison, Erik; Stein, Nils; Städler, Thomas; Zhou, Yongfeng; Huang, Sanwen

The Platinum Pedigree: a long-read benchmark for genetic variants

白金谱系:基因变异的长读长基准

Kronenberg, Zev; Nolan, Cillian; Porubsky, David; Mokveld, Tom; Rowell, William J; Lee, Sangjin; Dolzhenko, Egor; Chang, Pi-Chuan; Holt, James M; Saunders, Christopher T; Olson, Nathan D; Steely, Cody J; McGee, Sean; Guarracino, Andrea; Koundinya, Nidhi; Harvey, William T; Watkins, W Scott; Munson, Katherine M; Hoekzema, Kendra; Chua, Khi Pin; Chen, Xiao; Fanslow, Cairbre; Lambert, Christine; Dashnow, Harriet; Garrison, Erik; Smith, Joshua D; Lansdorp, Peter M; Zook, Justin M; Carroll, Andrew; Jorde, Lynn B; Neklason, Deborah W; Quinlan, Aaron R; Eichler, Evan E; Eberle, Michael A

Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes.

人科基因组中核糖体DNA阵列的染色体特异性表观遗传控制和传递。

Potapova Tamara A, Kostos Paxton, McKinney Sean, Borchers Matthew, Haug Jeff, Guarracino Andrea, Solar Steven J, Mattingly Mark, Anez Graciela Monfort, de Lima Leonardo Gomes, Wang Yan, Zhao Chongbei, Hall Kate, Gogol Madelaine, Hoffman Sophie, Antipov Dmitry, Rhie Arang, Cechova Monika, Miga Karen H, Garrison Erik, Phillippy Adam M, Gerton Jennifer L

Pangenome-Informed Language Models for Synthetic Genome Sequence Generation

基于泛基因组信息的语言模型用于合成基因组序列生成

Huang, Pengzhi; Charton, François; Schmelzle, Jan-Niklas M; Darnell, Shelby S; Prins, Pjotr; Garrison, Erik; Suh, G Edward

Comparative population pangenomes reveal unexpected complexity and fitness effects of structural variants

比较群体泛基因组揭示了结构变异的意外复杂性及其对适应性的影响

Edwards, Scott V; Fang, Bohao; Khost, Danielle; Kolyfetis, George E; Cheek, Rebecca G; DeRaad, Devon A; Chen, Nancy; Fitzpatrick, John W; McCormack, John E; Funk, W Chris; Ghalambor, Cameron K; Garrison, Erik; Guarracino, Andrea; Li, Heng; Sackton, Timothy B

wgatools: an ultrafast toolkit for manipulating whole-genome alignments

wgatools:用于操作全基因组比对的超快速工具包

Wei, Wenjie; Gui, Songtao; Yang, Jian; Garrison, Erik; Yan, Jianbing; Liu, Hai-Jun