日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

ShinyEvents: harmonizing longitudinal data for real-world survival estimation

ShinyEvents:协调纵向数据以进行真实世界生存率估计

Obermayer, Alyssa; Davis, Joshua; Talada, Divya Priyanka; Teng, Mingxiang; Eschrich, Steven; Yin, Vivien; Spakowicz, Daniel; Chatterjee, Dipankor; Rounbehler, Robert J; Churchman, Michelle L; Tarhini, Ahmad A; Wang, Xuefeng; Gupta, Sumati; Markowitz, Joseph; Goecks, Jeremy; Li, Roger; Rodrigues Pessoa, Rodrigo; Manley, Brandon J; Tan, Aik-Choon; Grass, G Daniel; Chen, Dung-Tsa; Shaw, Timothy I

Predicting anti-PD-1 immune checkpoint blockade response in melanoma patients with spatially aware machine learning models

利用空间感知机器学习模型预测黑色素瘤患者对PD-1免疫检查点阻断疗法的反应

Pybus, Alyssa; Kirchgaessner, Raphael; Nguyen, Jonathan; Moran Segura, Carlos; Morais Lyra, Paulo Cilas Jr; Rose, Trevor; Gray, Jhanelle; Goecks, Jeremy; Markowitz, Joseph

Informatics at the Frontier of Cancer Research

癌症研究前沿的信息学

Noller, Kathleen; Botsis, Taxiarchis; Camara, Pablo G; Ciotti, Lauren; Cooper, Lee A D; Goecks, Jeremy; Griffith, Malachi; Haas, Brian J; Ideker, Trey; Karchin, Rachel; Kontos, Despina; Lai, Jiaying; Marcus, Daniel; Meyer, Clifford A; Naegle, Kristen; Pati, Sarthak; Peters, Bjoern; Pratt, Dexter; Raphael, Benjamin J; Reich, Michael; Savova, Guergana K; Wright, Carrie; Fertig, Elana J; Bakas, Spyridon

Imputing single-cell protein abundance in multiplex tissue imaging

在多重组织成像中推断单细胞蛋白丰度

Kirchgaessner, Raphael; Watson, Cameron; Creason, Allison; Keutler, Kaya; Goecks, Jeremy

ShinyEvents: harmonizing longitudinal data for real world survival estimation

ShinyEvents:协调纵向数据以进行真实世界生存率估计

Obermayer, Alyssa; Davis, Joshua; Talada, Divya Priyanka; Teng, Mingxiang; Eschrich, Steven; Yin, Vivien; Spakowicz, Daniel; Dhrubo, Dipankor; Rounbehler, Robert J; Churchman, Michelle L; Tarhini, Ahmad A; Wang, Xuefeng; Gupta, Sumati; Markowitz, Joseph; Goecks, Jeremy; Li, Roger; Rodriguez-Pessoa, Rodrigo; Manley, Brandon J; Tan, Aik-Choon; Grass, G Daniel; Chen, Dung-Tsa; Shaw, Timothy I

Standardizing RNA-seq Analysis of Fungal Pathogens Using BRC-Analytics and Agentic AI: A Candidozyma auris Case Study

利用BRC-Analytics和Agentic AI对真菌病原体进行标准化RNA-seq分析:以耳念珠菌为例

Nekrutenko, Anton; Callan, Danielle; Van Den Beek, Marius; Baker, Dannon; Rogers, David; Guerler, Aysam; Chilton, John; Clawson, Hiram; Cain, Scott; O'Meara, Teresa; Beavers, Kelsey; Schatz, Michael; Haeussler, Maximilian; Gruning, Bjorn; Goecks, Jeremy; Pond, Sergei Kosakovsky

SyntheVAEiser: augmenting traditional machine learning methods with VAE-based gene expression sample generation for improved cancer subtype predictions

SyntheVAEiser:利用基于VAE的基因表达样本生成方法增强传统机器学习方法,以提高癌症亚型预测的准确性

Karlberg, Brian; Kirchgaessner, Raphael; Lee, Jordan; Peterkort, Matthew; Beckman, Liam; Goecks, Jeremy; Ellrott, Kyle

Machine Learning Links T-cell Function and Spatial Localization to Neoadjuvant Immunotherapy and Clinical Outcome in Pancreatic Cancer

机器学习将T细胞功能和空间定位与胰腺癌新辅助免疫疗法和临床结果联系起来

Blise, Katie E; Sivagnanam, Shamilene; Betts, Courtney B; Betre, Konjit; Kirchberger, Nell; Tate, Benjamin J; Furth, Emma E; Dias Costa, Andressa; Nowak, Jonathan A; Wolpin, Brian M; Vonderheide, Robert H; Goecks, Jeremy; Coussens, Lisa M; Byrne, Katelyn T

Machine learning links T cell function and spatial localization to neoadjuvant immunotherapy and clinical outcome in pancreatic cancer

机器学习将T细胞功能和空间定位与胰腺癌新辅助免疫疗法和临床结果联系起来

Blise, Katie E; Sivagnanam, Shamilene; Betts, Courtney B; Betre, Konjit; Kirchberger, Nell; Tate, Benjamin; Furth, Emma E; Dias Costa, Andressa; Nowak, Jonathan A; Wolpin, Brian M; Vonderheide, Robert H; Goecks, Jeremy; Coussens, Lisa M; Byrne, Katelyn T

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

MCMICRO:一种可扩展的模块化图像处理流程,用于多重组织成像

Schapiro, Denis; Sokolov, Artem; Yapp, Clarence; Chen, Yu-An; Muhlich, Jeremy L; Hess, Joshua; Creason, Allison L; Nirmal, Ajit J; Baker, Gregory J; Nariya, Maulik K; Lin, Jia-Ren; Maliga, Zoltan; Jacobson, Connor A; Hodgman, Matthew W; Ruokonen, Juha; Farhi, Samouil L; Abbondanza, Domenic; McKinley, Eliot T; Persson, Daniel; Betts, Courtney; Sivagnanam, Shamilene; Regev, Aviv; Goecks, Jeremy; Coffey, Robert J; Coussens, Lisa M; Santagata, Sandro; Sorger, Peter K