日期:
2020 年 — 2026 年
2020
2021
2022
2023
2024
2025
2026
影响因子:

Landscape of cohesin-mediated chromatin loops in the human genome

人类基因组中黏连蛋白介导的染色质环状结构

Fabian Grubert #, Rohith Srivas #, Damek V Spacek #, Maya Kasowski #, Mariana Ruiz-Velasco, Nasa Sinnott-Armstrong, Peyton Greenside, Anil Narasimha, Qing Liu, Benjamin Geller, Akshay Sanghi, Michael Kulik, Silin Sa, Marlene Rabinovitch, Anshul Kundaje, Stephen Dalton, Judith B Zaugg, Michael Snyder

Discovery of common and rare genetic risk variants for colorectal cancer

发现结直肠癌的常见和罕见遗传风险变异

Huyghe, Jeroen R; Bien, Stephanie A; Harrison, Tabitha A; Kang, Hyun Min; Chen, Sai; Schmit, Stephanie L; Conti, David V; Qu, Conghui; Jeon, Jihyoun; Edlund, Christopher K; Greenside, Peyton; Wainberg, Michael; Schumacher, Fredrick R; Smith, Joshua D; Levine, David M; Nelson, Sarah C; Sinnott-Armstrong, Nasa A; Albanes, Demetrius; Alonso, M Henar; Anderson, Kristin; Arnau-Collell, Coral; Arndt, Volker; Bamia, Christina; Banbury, Barbara L; Baron, John A; Berndt, Sonja I; Bézieau, Stéphane; Bishop, D Timothy; Boehm, Juergen; Boeing, Heiner; Brenner, Hermann; Brezina, Stefanie; Buch, Stephan; Buchanan, Daniel D; Burnett-Hartman, Andrea; Butterbach, Katja; Caan, Bette J; Campbell, Peter T; Carlson, Christopher S; Castellví-Bel, Sergi; Chan, Andrew T; Chang-Claude, Jenny; Chanock, Stephen J; Chirlaque, Maria-Dolores; Cho, Sang Hee; Connolly, Charles M; Cross, Amanda J; Cuk, Katarina; Curtis, Keith R; de la Chapelle, Albert; Doheny, Kimberly F; Duggan, David; Easton, Douglas F; Elias, Sjoerd G; Elliott, Faye; English, Dallas R; Feskens, Edith J M; Figueiredo, Jane C; Fischer, Rocky; FitzGerald, Liesel M; Forman, David; Gala, Manish; Gallinger, Steven; Gauderman, W James; Giles, Graham G; Gillanders, Elizabeth; Gong, Jian; Goodman, Phyllis J; Grady, William M; Grove, John S; Gsur, Andrea; Gunter, Marc J; Haile, Robert W; Hampe, Jochen; Hampel, Heather; Harlid, Sophia; Hayes, Richard B; Hofer, Philipp; Hoffmeister, Michael; Hopper, John L; Hsu, Wan-Ling; Huang, Wen-Yi; Hudson, Thomas J; Hunter, David J; Ibañez-Sanz, Gemma; Idos, Gregory E; Ingersoll, Roxann; Jackson, Rebecca D; Jacobs, Eric J; Jenkins, Mark A; Joshi, Amit D; Joshu, Corinne E; Keku, Temitope O; Key, Timothy J; Kim, Hyeong Rok; Kobayashi, Emiko; Kolonel, Laurence N; Kooperberg, Charles; Kühn, Tilman; Küry, Sébastien; Kweon, Sun-Seog; Larsson, Susanna C; Laurie, Cecelia A; Le Marchand, Loic; Leal, Suzanne M; Lee, Soo Chin; Lejbkowicz, Flavio; Lemire, Mathieu; Li, Christopher I; Li, Li; Lieb, Wolfgang; Lin, Yi; Lindblom, Annika; Lindor, Noralane M; Ling, Hua; Louie, Tin L; Männistö, Satu; Markowitz, Sanford D; Martín, Vicente; Masala, Giovanna; McNeil, Caroline E; Melas, Marilena; Milne, Roger L; Moreno, Lorena; Murphy, Neil; Myte, Robin; Naccarati, Alessio; Newcomb, Polly A; Offit, Kenneth; Ogino, Shuji; Onland-Moret, N Charlotte; Pardini, Barbara; Parfrey, Patrick S; Pearlman, Rachel; Perduca, Vittorio; Pharoah, Paul D P; Pinchev, Mila; Platz, Elizabeth A; Prentice, Ross L; Pugh, Elizabeth; Raskin, Leon; Rennert, Gad; Rennert, Hedy S; Riboli, Elio; Rodríguez-Barranco, Miguel; Romm, Jane; Sakoda, Lori C; Schafmayer, Clemens; Schoen, Robert E; Seminara, Daniela; Shah, Mitul; Shelford, Tameka; Shin, Min-Ho; Shulman, Katerina; Sieri, Sabina; Slattery, Martha L; Southey, Melissa C; Stadler, Zsofia K; Stegmaier, Christa; Su, Yu-Ru; Tangen, Catherine M; Thibodeau, Stephen N; Thomas, Duncan C; Thomas, Sushma S; Toland, Amanda E; Trichopoulou, Antonia; Ulrich, Cornelia M; Van Den Berg, David J; van Duijnhoven, Franzel J B; Van Guelpen, Bethany; van Kranen, Henk; Vijai, Joseph; Visvanathan, Kala; Vodicka, Pavel; Vodickova, Ludmila; Vymetalkova, Veronika; Weigl, Korbinian; Weinstein, Stephanie J; White, Emily; Win, Aung Ko; Wolf, C Roland; Wolk, Alicja; Woods, Michael O; Wu, Anna H; Zaidi, Syed H; Zanke, Brent W; Zhang, Qing; Zheng, Wei; Scacheri, Peter C; Potter, John D; Bassik, Michael C; Kundaje, Anshul; Casey, Graham; Moreno, Victor; Abecasis, Goncalo R; Nickerson, Deborah A; Gruber, Stephen B; Hsu, Li; Peters, Ulrike

Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements

减轻 CRISPR-Cas9 筛选必需非编码元件时的脱靶毒性

Josh Tycko, Michael Wainberg, Georgi K Marinov, Oana Ursu, Gaelen T Hess, Braeden K Ego, Aradhana, Amy Li, Alisa Truong, Alexandro E Trevino, Kaitlyn Spees, David Yao, Irene M Kaplow, Peyton G Greenside, David W Morgens, Douglas H Phanstiel, Michael P Snyder, Lacramioara Bintu, William J Greenleaf, 

Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays

利用大规模并行报告基因检测的神经网络模型破译调控DNA序列和非编码遗传变异

Movva, Rajiv; Greenside, Peyton; Marinov, Georgi K; Nair, Surag; Shrikumar, Avanti; Kundaje, Anshul

Intertumoral Heterogeneity in SCLC Is Influenced by the Cell Type of Origin

小细胞肺癌的肿瘤间异质性受细胞来源类型的影响

Dian Yang, Sarah K Denny, Peyton G Greenside, Andrea C Chaikovsky, Jennifer J Brady, Youcef Ouadah, Jeffrey M Granja, Nadine S Jahchan, Jing Shan Lim, Shirley Kwok, Christina S Kong, Anna S Berghoff, Anna Schmitt, H Christian Reinhardt, Kwon-Sik Park, Matthias Preusser, Anshul Kundaje, William J Gre

Impact of regulatory variation across human iPSCs and differentiated cells

人类诱导多能干细胞和分化细胞中调控变异的影响

Banovich, Nicholas E; Li, Yang I; Raj, Anil; Ward, Michelle C; Greenside, Peyton; Calderon, Diego; Tung, Po Yuan; Burnett, Jonathan E; Myrthil, Marsha; Thomas, Samantha M; Burrows, Courtney K; Romero, Irene Gallego; Pavlovic, Bryan J; Kundaje, Anshul; Pritchard, Jonathan K; Gilad, Yoav

Molecular definition of a metastatic lung cancer state reveals a targetable CD109-Janus kinase-Stat axis

转移性肺癌状态的分子定义揭示了可靶向的 CD109-Janus 激酶-Stat 轴

Chen-Hua Chuang, Peyton G Greenside, Zoë N Rogers, Jennifer J Brady, Dian Yang, Rosanna K Ma, Deborah R Caswell, Shin-Heng Chiou, Aidan F Winters, Barbara M Grüner, Gokul Ramaswami, Andrew L Spencley, Kimberly E Kopecky, Leanne C Sayles, E Alejandro Sweet-Cordero, Jin Billy Li, Anshul Kundaje, Monte

An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues

改进的 ATAC-seq 协议可减少背景并实现对冷冻组织的检测

M Ryan Corces, Alexandro E Trevino, Emily G Hamilton, Peyton G Greenside, Nicholas A Sinnott-Armstrong, Sam Vesuna, Ansuman T Satpathy, Adam J Rubin, Kathleen S Montine, Beijing Wu, Arwa Kathiria, Seung Woo Cho, Maxwell R Mumbach, Ava C Carter, Maya Kasowski, Lisa A Orloff, Viviana I Risca, Anshul K

Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements

原代人细胞中的增强子连接组可识别疾病相关DNA元件的靶基因

Maxwell R Mumbach ,Ansuman T Satpathy ,Evan A Boyle ,Chao Dai ,Benjamin G Gowen ,Seung Woo Cho ,Michelle L Nguyen ,Adam J Rubin ,Jeffrey M Granja ,Katelynn R Kazane ,Yuning Wei ,Trieu Nguyen ,Peyton G Greenside ,M Ryan Corces ,Josh Tycko ,Dimitre R Simeonov ,Nabeela Suliman ,Rui Li ,Jin Xu ,Ryan A Flynn ,Anshul Kundaje ,Paul A Khavari ,Alexander Marson ,Jacob E Corn ,Thomas Quertermous ,William J Greenleaf ,Howard Y Chang

Evaluation of RNAi and CRISPR technologies by large-scale gene expression profiling in the Connectivity Map

利用连接图谱进行大规模基因表达谱分析,评估RNAi和CRISPR技术

Smith, Ian; Greenside, Peyton G; Natoli, Ted; Lahr, David L; Wadden, David; Tirosh, Itay; Narayan, Rajiv; Root, David E; Golub, Todd R; Subramanian, Aravind; Doench, John G