Grosse Ivo相关文献与解析，生知库 | 链接生命科学的每一步

Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台基序发现和基准测试，以探索研究较少的人类转录因子的结合特异性

doi:10.1038/s42003-025-08909-9

Vorontsov, Ilya E; Kozin, Ivan; Abramov, Sergey; Boytsov, Alexandr; Jolma, Arttu; Albu, Mihai; Ambrosini, Giovanna; Faltejskova, Katerina; Gralak, Antoni J; Gryzunov, Nikita; Inukai, Sachi; Kolmykov, Semyon; Kravchenko, Pavel; Kribelbauer-Swietek, Judith F; Laverty, Kaitlin U; Nozdrin, Vladimir; Patel, Zain M; Penzar, Dmitry; Plescher, Marie-Luise; Pour, Sara E; Razavi, Rozita; Yang, Ally W H; Yevshin, Ivan; Zinkevich, Arsenii; Weirauch, Matthew T; Bucher, Philipp; Deplancke, Bart; Fornes, Oriol; Grau, Jan; Grosse, Ivo; Kolpakov, Fedor A; Makeev, Vsevolod J; Hughes, Timothy R; Kulakovskiy, Ivan V

发表日期：2025

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Inferring binding specificities of human transcription factors with the wisdom of crowds

利用群体智慧推断人类转录因子的结合特异性

期刊:

影响因子:

doi:10.1101/2025.11.16.688692

Gryzunov, Nikita; Penzar, Dmitry; Kamenets, Vasilii; Vyaltsev, Valery; Kozin, Ivan; Eliseeva, Irina A; Nozdrin, Vladimir; Vorontsov, Ilya E; Bushuev, Sergey; Strekalovskikh, Vadim; Zinkevich, Arsenii; Andrews, Gregory; Bedarew, Matwej; Blass, Ido; Frolov, Dmitry; Lariushina, Iuliia; Moore, Jill; Orenstein, Yaron; Roev, German; Salimov, Danil; Shimshoviz, Noam; Tziony, Ido; Weng, Zhiping; Bucher, Philipp; Deplancke, Bart; Fornes, Oriol; Grau, Jan; Grosse, Ivo; Jolma, Arttu; Kolpakov, Fedor A; Makeev, Vsevolod J; Hughes, Timothy R; Kulakovskiy, Ivan V

发表日期：2025

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Advancing Anticancer Drug Discovery: Leveraging Metabolomics and Machine Learning for Mode of Action Prediction by Pattern Recognition

推进抗癌药物发现：利用代谢组学和机器学习进行模式识别以预测作用机制

期刊:Advanced Science

影响因子:14.1

doi:10.1002/advs.202404085

Saoud, Mohamad; Grau, Jan; Rennert, Robert; Mueller, Thomas; Yousefi, Mohammad; Davari, Mehdi D; Hause, Bettina; Csuk, René; Rashan, Luay; Grosse, Ivo; Tissier, Alain; Wessjohann, Ludger A; Balcke, Gerd U

Cross-platform DNA motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台DNA基序发现和基准测试，以探索研究较少的人类转录因子的结合特异性

期刊:

影响因子:

doi:10.1101/2024.11.11.619379

Vorontsov, Ilya E; Kozin, Ivan; Abramov, Sergey; Boytsov, Alexandr; Jolma, Arttu; Albu, Mihai; Ambrosini, Giovanna; Faltejskova, Katerina; Gralak, Antoni J; Gryzunov, Nikita; Inukai, Sachi; Kolmykov, Semyon; Kravchenko, Pavel; Kribelbauer-Swietek, Judith F; Laverty, Kaitlin U; Nozdrin, Vladimir; Patel, Zain M; Penzar, Dmitry; Plescher, Marie-Luise; Pour, Sara E; Razavi, Rozita; Yang, Ally W H; Yevshin, Ivan; Zinkevich, Arsenii; Weirauch, Matthew T; Bucher, Philipp; Deplancke, Bart; Fornes, Oriol; Grau, Jan; Grosse, Ivo; Kolpakov, Fedor A; Makeev, Vsevolod J; Hughes, Timothy R; Kulakovskiy, Ivan V

发表日期：2024

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Advancing Anticancer Drug Discovery: Leveraging Metabolomics and Machine Learning for Mode of Action Prediction by Pattern Recognition (Adv. Sci. 47/2024)

推进抗癌药物发现：利用代谢组学和机器学习进行模式识别以预测作用机制（Adv. Sci. 47/2024）

期刊:

影响因子:

doi:10.1093/biostatistics/kxac015

Vu, Thao; Xu, Yuhang; Qiu, Yumou; Powers, Robert; Saoud, Mohamad; Grau, Jan; Rennert, Robert; Mueller, Thomas; Yousefi, Mohammad; Davari, Mehdi D; Hause, Bettina; Csuk, René; Rashan, Luay; Grosse, Ivo; Tissier, Alain; Wessjohann, Ludger A; Balcke, Gerd U

Transcriptional Analysis of Total CD8(+) T Cells and CD8(+)CD45RA(-) Memory T Cells From Young and Old Healthy Blood Donors

对年轻和年长健康献血者的总CD8(+)T细胞和CD8(+)CD45RA(-)记忆T细胞进行转录组分析

期刊:Frontiers in Immunology

影响因子:5.9

doi:10.3389/fimmu.2022.806906

Toma, Georgiana; Lemnian, Ioana Maria; Karapetian, Eliza; Grosse, Ivo; Seliger, Barbara

Taxonomic analysis of metagenomic data with kASA

利用kASA进行宏基因组数据的分类学分析

期刊:Nucleic Acids Research

影响因子:13.1

doi:10.1093/nar/gkab200

Weging, Silvio; Gogol-Döring, Andreas; Grosse, Ivo

发表日期：2021

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Detection of SARS-CoV-2 Derived Small RNAs and Changes in Circulating Small RNAs Associated with COVID-19

SARS-CoV-2衍生小RNA的检测及与COVID-19相关的循环小RNA的变化

期刊:Viruses-Basel

影响因子:3.5

doi:10.3390/v13081593

Grehl, Claudius; Schultheiß, Christoph; Hoffmann, Katrin; Binder, Mascha; Altmann, Thomas; Grosse, Ivo; Kuhlmann, Markus

SARS-CoV-2

发表日期：2021

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Urban areas as hotspots for bees and pollination but not a panacea for all insects

城市地区是蜜蜂和授粉的热点地区，但并非所有昆虫的避难所。

期刊:Nature Communications

影响因子:15.7

doi:10.1038/s41467-020-14496-6

Theodorou, Panagiotis; Radzevičiūtė, Rita; Lentendu, Guillaume; Kahnt, Belinda; Husemann, Martin; Bleidorn, Christoph; Settele, Josef; Schweiger, Oliver; Grosse, Ivo; Wubet, Tesfaye; Murray, Tomás E; Paxton, Robert J

发表日期：2020

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Fast barcode calling based on k-mer distances

基于k-mer距离的快速条形码识别

Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台基序发现和基准测试，以探索研究较少的人类转录因子的结合特异性

Inferring binding specificities of human transcription factors with the wisdom of crowds

利用群体智慧推断人类转录因子的结合特异性

Advancing Anticancer Drug Discovery: Leveraging Metabolomics and Machine Learning for Mode of Action Prediction by Pattern Recognition

推进抗癌药物发现：利用代谢组学和机器学习进行模式识别以预测作用机制

Cross-platform DNA motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors

跨平台DNA基序发现和基准测试，以探索研究较少的人类转录因子的结合特异性

Advancing Anticancer Drug Discovery: Leveraging Metabolomics and Machine Learning for Mode of Action Prediction by Pattern Recognition (Adv. Sci. 47/2024)

推进抗癌药物发现：利用代谢组学和机器学习进行模式识别以预测作用机制（Adv. Sci. 47/2024）

Transcriptional Analysis of Total CD8(+) T Cells and CD8(+)CD45RA(-) Memory T Cells From Young and Old Healthy Blood Donors

对年轻和年长健康献血者的总CD8(+)T细胞和CD8(+)CD45RA(-)记忆T细胞进行转录组分析

Taxonomic analysis of metagenomic data with kASA

利用kASA进行宏基因组数据的分类学分析

Detection of SARS-CoV-2 Derived Small RNAs and Changes in Circulating Small RNAs Associated with COVID-19

SARS-CoV-2衍生小RNA的检测及与COVID-19相关的循环小RNA的变化

Urban areas as hotspots for bees and pollination but not a panacea for all insects

城市地区是蜜蜂和授粉的热点地区，但并非所有昆虫的避难所。